Hb_005245_030

Information

Type -
Description -
Location Contig5245: 23287-26049
Sequence    

Annotation

kegg
ID pop:POPTR_0014s17170g
description POPTRDRAFT_732561; hypothetical protein
nr
ID XP_012084215.1
description PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g07570 [Jatropha curcas]
swissprot
ID Q0WRW8
description Cytochrome b561 and DOMON domain-containing protein At3g07570 OS=Arabidopsis thaliana GN=At3g07570 PE=2 SV=1
trembl
ID A0A067LD82
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15043 PE=4 SV=1
Gene Ontology
ID GO:0016021
description ferric-chelate reductase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46924: 25501-25949
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005245_030 0.0 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g07570 [Jatropha curcas]
2 Hb_016120_030 0.1082598099 - - hypothetical protein EUGRSUZ_D00080 [Eucalyptus grandis]
3 Hb_005373_030 0.1126532236 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002999_010 0.1152543809 - - PREDICTED: extracellular ribonuclease LE-like [Vitis vinifera]
5 Hb_004031_060 0.1170493393 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]
6 Hb_022597_010 0.1229018292 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
7 Hb_004617_010 0.1271904614 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
8 Hb_000243_240 0.1278567196 - - cytochrome P450 family protein [Populus trichocarpa]
9 Hb_011344_050 0.1280676366 - - PREDICTED: 21 kDa protein [Jatropha curcas]
10 Hb_003212_030 0.1293705897 - - multidrug resistance pump, putative [Ricinus communis]
11 Hb_000959_200 0.1307804522 - - PREDICTED: uncharacterized protein LOC105636578 [Jatropha curcas]
12 Hb_145975_010 0.1325132867 - - cytochrome P450, putative [Ricinus communis]
13 Hb_001296_010 0.1350315586 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000897_010 0.1360905531 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
15 Hb_004757_010 0.1382001214 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
16 Hb_007403_100 0.1383220902 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
17 Hb_002837_150 0.1388845947 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
18 Hb_159791_010 0.1391415468 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]
19 Hb_010863_020 0.1418083309 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
20 Hb_019053_050 0.1421390928 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005245_030 Hb_005245_030 Hb_016120_030 Hb_016120_030 Hb_005245_030--Hb_016120_030 Hb_005373_030 Hb_005373_030 Hb_005245_030--Hb_005373_030 Hb_002999_010 Hb_002999_010 Hb_005245_030--Hb_002999_010 Hb_004031_060 Hb_004031_060 Hb_005245_030--Hb_004031_060 Hb_022597_010 Hb_022597_010 Hb_005245_030--Hb_022597_010 Hb_004617_010 Hb_004617_010 Hb_005245_030--Hb_004617_010 Hb_016120_030--Hb_004031_060 Hb_016120_030--Hb_002999_010 Hb_140024_010 Hb_140024_010 Hb_016120_030--Hb_140024_010 Hb_019053_050 Hb_019053_050 Hb_016120_030--Hb_019053_050 Hb_004926_010 Hb_004926_010 Hb_016120_030--Hb_004926_010 Hb_001013_070 Hb_001013_070 Hb_005373_030--Hb_001013_070 Hb_005373_030--Hb_002999_010 Hb_003212_030 Hb_003212_030 Hb_005373_030--Hb_003212_030 Hb_033153_030 Hb_033153_030 Hb_005373_030--Hb_033153_030 Hb_000445_480 Hb_000445_480 Hb_005373_030--Hb_000445_480 Hb_007477_020 Hb_007477_020 Hb_005373_030--Hb_007477_020 Hb_000480_050 Hb_000480_050 Hb_002999_010--Hb_000480_050 Hb_002999_010--Hb_004926_010 Hb_002999_010--Hb_007477_020 Hb_002999_010--Hb_004031_060 Hb_004031_060--Hb_004926_010 Hb_004031_060--Hb_019053_050 Hb_004031_060--Hb_000480_050 Hb_001091_040 Hb_001091_040 Hb_004031_060--Hb_001091_040 Hb_001322_010 Hb_001322_010 Hb_022597_010--Hb_001322_010 Hb_000860_030 Hb_000860_030 Hb_022597_010--Hb_000860_030 Hb_000897_010 Hb_000897_010 Hb_022597_010--Hb_000897_010 Hb_000638_110 Hb_000638_110 Hb_022597_010--Hb_000638_110 Hb_005736_110 Hb_005736_110 Hb_022597_010--Hb_005736_110 Hb_002837_150 Hb_002837_150 Hb_004617_010--Hb_002837_150 Hb_011344_050 Hb_011344_050 Hb_004617_010--Hb_011344_050 Hb_159791_010 Hb_159791_010 Hb_004617_010--Hb_159791_010 Hb_004757_010 Hb_004757_010 Hb_004617_010--Hb_004757_010 Hb_001141_430 Hb_001141_430 Hb_004617_010--Hb_001141_430 Hb_145975_010 Hb_145975_010 Hb_004617_010--Hb_145975_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.11424 0.548519 27.4675 0.0171147 0.0177675
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.40587 1.77998

CAGE analysis