Hb_022693_090

Information

Type -
Description -
Location Contig22693: 231745-233223
Sequence    

Annotation

kegg
ID rcu:RCOM_0866640
description glycosyltransferase, putative
nr
ID XP_002519899.1
description glycosyltransferase, putative [Ricinus communis]
swissprot
ID Q59002
description Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1
trembl
ID B9S1N4
description Glycosyltransferase, putative OS=Ricinus communis GN=RCOM_0866640 PE=4 SV=1
Gene Ontology
ID GO:0017176
description glycosyl transferase family 1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23565: 231774-232013
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022693_090 0.0 - - glycosyltransferase, putative [Ricinus communis]
2 Hb_000453_290 0.0846345459 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
3 Hb_002384_030 0.0886726827 - - conserved hypothetical protein [Ricinus communis]
4 Hb_009225_070 0.0947288395 - - tonoplast intrinsic protein, putative [Ricinus communis]
5 Hb_001360_020 0.0970888074 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
6 Hb_011314_010 0.0982784085 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
7 Hb_002592_070 0.0995139018 - - hypothetical protein VITISV_020993 [Vitis vinifera]
8 Hb_003126_120 0.1015204821 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
9 Hb_027405_010 0.1016043001 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
10 Hb_002000_100 0.1042760094 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
11 Hb_001117_180 0.1077910276 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
12 Hb_000468_050 0.1117257617 - - -
13 Hb_002627_010 0.1131458711 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
14 Hb_003582_030 0.1136608439 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
15 Hb_154038_040 0.1147180847 - - nutrient reservoir, putative [Ricinus communis]
16 Hb_034688_030 0.120924555 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
17 Hb_000028_550 0.1224010689 - - unknown [Medicago truncatula]
18 Hb_008731_010 0.1234873968 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
19 Hb_142056_010 0.1235110259 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
20 Hb_000816_150 0.1239137823 - - oligopeptide transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_022693_090 Hb_022693_090 Hb_000453_290 Hb_000453_290 Hb_022693_090--Hb_000453_290 Hb_002384_030 Hb_002384_030 Hb_022693_090--Hb_002384_030 Hb_009225_070 Hb_009225_070 Hb_022693_090--Hb_009225_070 Hb_001360_020 Hb_001360_020 Hb_022693_090--Hb_001360_020 Hb_011314_010 Hb_011314_010 Hb_022693_090--Hb_011314_010 Hb_002592_070 Hb_002592_070 Hb_022693_090--Hb_002592_070 Hb_000453_290--Hb_002592_070 Hb_000468_050 Hb_000468_050 Hb_000453_290--Hb_000468_050 Hb_002000_100 Hb_002000_100 Hb_000453_290--Hb_002000_100 Hb_027405_010 Hb_027405_010 Hb_000453_290--Hb_027405_010 Hb_000453_290--Hb_001360_020 Hb_008731_010 Hb_008731_010 Hb_002384_030--Hb_008731_010 Hb_002384_030--Hb_001360_020 Hb_002384_030--Hb_027405_010 Hb_002384_030--Hb_002000_100 Hb_000344_030 Hb_000344_030 Hb_002384_030--Hb_000344_030 Hb_009225_070--Hb_000468_050 Hb_009225_070--Hb_002592_070 Hb_000816_150 Hb_000816_150 Hb_009225_070--Hb_000816_150 Hb_009225_070--Hb_011314_010 Hb_012553_030 Hb_012553_030 Hb_009225_070--Hb_012553_030 Hb_001360_020--Hb_002000_100 Hb_142056_010 Hb_142056_010 Hb_001360_020--Hb_142056_010 Hb_002007_330 Hb_002007_330 Hb_001360_020--Hb_002007_330 Hb_001360_020--Hb_008731_010 Hb_004374_040 Hb_004374_040 Hb_011314_010--Hb_004374_040 Hb_003126_120 Hb_003126_120 Hb_011314_010--Hb_003126_120 Hb_004785_170 Hb_004785_170 Hb_011314_010--Hb_004785_170 Hb_003582_030 Hb_003582_030 Hb_011314_010--Hb_003582_030 Hb_002592_070--Hb_000468_050 Hb_002592_070--Hb_012553_030 Hb_001117_180 Hb_001117_180 Hb_002592_070--Hb_001117_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0557233 0.979633 0.434254 4.00542 0.0130468 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.448622 0.939772

CAGE analysis