Hb_000920_120

Information

Type -
Description -
Location Contig920: 66514-67189
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62389: 66476-67233
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000920_120 0.0 - - -
2 Hb_000087_160 0.0939421051 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_012217_010 0.1060567075 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Jatropha curcas]
4 Hb_002030_190 0.1102874085 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007441_100 0.1104021495 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 12 [Populus euphratica]
6 Hb_001500_020 0.1128157161 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000188_140 0.1149449604 - - PREDICTED: germin-like protein subfamily 3 member 2 [Jatropha curcas]
8 Hb_000152_630 0.1156088453 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Jatropha curcas]
9 Hb_001300_030 0.1156430639 - - hypothetical protein JCGZ_13871 [Jatropha curcas]
10 Hb_001418_050 0.1162661989 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
11 Hb_006351_050 0.1184441965 - - PREDICTED: uncharacterized protein LOC105133646 [Populus euphratica]
12 Hb_000847_110 0.1190947607 - - conserved hypothetical protein [Ricinus communis]
13 Hb_011930_090 0.1199871559 - - PREDICTED: thioredoxin H7-like [Jatropha curcas]
14 Hb_001541_170 0.1205303934 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
15 Hb_000230_220 0.1233748098 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003598_050 0.1239827587 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
17 Hb_013399_060 0.1240112846 - - PREDICTED: uncharacterized protein LOC105133408 [Populus euphratica]
18 Hb_000521_060 0.1251411448 - - PREDICTED: protein YLS3-like [Jatropha curcas]
19 Hb_004757_010 0.1268408354 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
20 Hb_001712_010 0.1271269833 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000920_120 Hb_000920_120 Hb_000087_160 Hb_000087_160 Hb_000920_120--Hb_000087_160 Hb_012217_010 Hb_012217_010 Hb_000920_120--Hb_012217_010 Hb_002030_190 Hb_002030_190 Hb_000920_120--Hb_002030_190 Hb_007441_100 Hb_007441_100 Hb_000920_120--Hb_007441_100 Hb_001500_020 Hb_001500_020 Hb_000920_120--Hb_001500_020 Hb_000188_140 Hb_000188_140 Hb_000920_120--Hb_000188_140 Hb_000959_170 Hb_000959_170 Hb_000087_160--Hb_000959_170 Hb_159791_010 Hb_159791_010 Hb_000087_160--Hb_159791_010 Hb_011930_090 Hb_011930_090 Hb_000087_160--Hb_011930_090 Hb_187906_010 Hb_187906_010 Hb_000087_160--Hb_187906_010 Hb_019299_010 Hb_019299_010 Hb_000087_160--Hb_019299_010 Hb_000230_220 Hb_000230_220 Hb_000087_160--Hb_000230_220 Hb_012217_010--Hb_011930_090 Hb_012217_010--Hb_007441_100 Hb_032260_040 Hb_032260_040 Hb_012217_010--Hb_032260_040 Hb_000847_110 Hb_000847_110 Hb_012217_010--Hb_000847_110 Hb_001541_170 Hb_001541_170 Hb_012217_010--Hb_001541_170 Hb_012217_010--Hb_019299_010 Hb_000206_270 Hb_000206_270 Hb_002030_190--Hb_000206_270 Hb_011344_050 Hb_011344_050 Hb_002030_190--Hb_011344_050 Hb_001296_010 Hb_001296_010 Hb_002030_190--Hb_001296_010 Hb_000152_630 Hb_000152_630 Hb_002030_190--Hb_000152_630 Hb_013399_060 Hb_013399_060 Hb_002030_190--Hb_013399_060 Hb_007441_100--Hb_000847_110 Hb_000378_030 Hb_000378_030 Hb_007441_100--Hb_000378_030 Hb_000098_230 Hb_000098_230 Hb_007441_100--Hb_000098_230 Hb_001418_050 Hb_001418_050 Hb_007441_100--Hb_001418_050 Hb_007441_100--Hb_001541_170 Hb_006351_050 Hb_006351_050 Hb_001500_020--Hb_006351_050 Hb_180088_010 Hb_180088_010 Hb_001500_020--Hb_180088_010 Hb_003598_050 Hb_003598_050 Hb_001500_020--Hb_003598_050 Hb_112950_010 Hb_112950_010 Hb_001500_020--Hb_112950_010 Hb_135757_030 Hb_135757_030 Hb_001500_020--Hb_135757_030 Hb_000172_450 Hb_000172_450 Hb_001500_020--Hb_000172_450 Hb_000188_140--Hb_000152_630 Hb_000188_140--Hb_000230_220 Hb_069384_010 Hb_069384_010 Hb_000188_140--Hb_069384_010 Hb_000186_090 Hb_000186_090 Hb_000188_140--Hb_000186_090 Hb_000188_140--Hb_000087_160 Hb_084304_010 Hb_084304_010 Hb_000188_140--Hb_084304_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.399674 3.45419 3.0408 36.3691 0.101402 0.183678
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.237866 0 0.290234 0.245254 3.81446

CAGE analysis