Hb_002370_050

Information

Type -
Description -
Location Contig2370: 54881-55688
Sequence    

Annotation

kegg
ID rcu:RCOM_0745070
description hypothetical protein
nr
ID KDP29687.1
description hypothetical protein JCGZ_18849 [Jatropha curcas]
swissprot
ID Q9FJK8
description Probable disease resistance RPP8-like protein 4 OS=Arabidopsis thaliana GN=RPP8L4 PE=2 SV=1
trembl
ID A0A067K0M7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18849 PE=4 SV=1
Gene Ontology
ID GO:0016787
description disease resistance protein rpm1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002370_050 0.0 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
2 Hb_007237_080 0.0813205021 - - amino acid transporter, putative [Ricinus communis]
3 Hb_002809_080 0.0823573955 - - conserved hypothetical protein [Ricinus communis]
4 Hb_031224_010 0.0873534252 - - -
5 Hb_000329_010 0.094085172 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
6 Hb_027405_010 0.0971713446 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
7 Hb_026144_040 0.1002626972 - - -
8 Hb_003633_170 0.1008163248 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000453_290 0.1009426349 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
10 Hb_006154_010 0.1026652294 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
11 Hb_000076_280 0.1039241623 - - PREDICTED: pectinesterase-like [Populus euphratica]
12 Hb_001117_180 0.1077024982 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
13 Hb_002384_030 0.1121447526 - - conserved hypothetical protein [Ricinus communis]
14 Hb_149055_010 0.1127492766 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
15 Hb_178049_010 0.1140654415 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
16 Hb_000419_140 0.1177129416 - - Aquaporin PIP2.1, putative [Ricinus communis]
17 Hb_000103_300 0.1178411124 - - PREDICTED: perakine reductase-like [Jatropha curcas]
18 Hb_142056_010 0.1194556443 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
19 Hb_007370_010 0.120060339 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
20 Hb_027400_020 0.1211163515 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002370_050 Hb_002370_050 Hb_007237_080 Hb_007237_080 Hb_002370_050--Hb_007237_080 Hb_002809_080 Hb_002809_080 Hb_002370_050--Hb_002809_080 Hb_031224_010 Hb_031224_010 Hb_002370_050--Hb_031224_010 Hb_000329_010 Hb_000329_010 Hb_002370_050--Hb_000329_010 Hb_027405_010 Hb_027405_010 Hb_002370_050--Hb_027405_010 Hb_026144_040 Hb_026144_040 Hb_002370_050--Hb_026144_040 Hb_007237_080--Hb_026144_040 Hb_000162_070 Hb_000162_070 Hb_007237_080--Hb_000162_070 Hb_001269_400 Hb_001269_400 Hb_007237_080--Hb_001269_400 Hb_002811_110 Hb_002811_110 Hb_007237_080--Hb_002811_110 Hb_000571_060 Hb_000571_060 Hb_007237_080--Hb_000571_060 Hb_002809_080--Hb_000329_010 Hb_000076_280 Hb_000076_280 Hb_002809_080--Hb_000076_280 Hb_005000_280 Hb_005000_280 Hb_002809_080--Hb_005000_280 Hb_149055_010 Hb_149055_010 Hb_002809_080--Hb_149055_010 Hb_002809_080--Hb_031224_010 Hb_003633_170 Hb_003633_170 Hb_031224_010--Hb_003633_170 Hb_031224_010--Hb_000329_010 Hb_002566_020 Hb_002566_020 Hb_031224_010--Hb_002566_020 Hb_007370_010 Hb_007370_010 Hb_031224_010--Hb_007370_010 Hb_000329_010--Hb_000076_280 Hb_001769_070 Hb_001769_070 Hb_000329_010--Hb_001769_070 Hb_000329_010--Hb_149055_010 Hb_000419_140 Hb_000419_140 Hb_000329_010--Hb_000419_140 Hb_002384_030 Hb_002384_030 Hb_027405_010--Hb_002384_030 Hb_027405_010--Hb_000076_280 Hb_001117_180 Hb_001117_180 Hb_027405_010--Hb_001117_180 Hb_000453_290 Hb_000453_290 Hb_027405_010--Hb_000453_290 Hb_027400_020 Hb_027400_020 Hb_027405_010--Hb_027400_020 Hb_008598_010 Hb_008598_010 Hb_026144_040--Hb_008598_010 Hb_026144_040--Hb_000162_070 Hb_000045_080 Hb_000045_080 Hb_026144_040--Hb_000045_080 Hb_002598_020 Hb_002598_020 Hb_026144_040--Hb_002598_020 Hb_002151_020 Hb_002151_020 Hb_026144_040--Hb_002151_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.16952 2.17247 10.7806 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.58982 3.61234

CAGE analysis