Hb_061054_010

Information

Type -
Description -
Location Contig61054: 71-1665
Sequence    

Annotation

kegg
ID pop:POPTR_0056s00200g
description hypothetical protein
nr
ID KDP42637.1
description hypothetical protein JCGZ_01675 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2I2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01675 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50986: 1245-1549
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061054_010 0.0 - - hypothetical protein JCGZ_01675 [Jatropha curcas]
2 Hb_002627_010 0.119112617 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
3 Hb_136033_010 0.1534177991 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Gossypium raimondii]
4 Hb_000028_550 0.1535642996 - - unknown [Medicago truncatula]
5 Hb_139461_010 0.1615895991 desease resistance Gene Name: NB-ARC Cc-nbs-lrr resistance protein, putative [Theobroma cacao]
6 Hb_002749_040 0.1626394123 - - Ribosomal protein L6 family protein [Theobroma cacao]
7 Hb_000181_260 0.1644566448 - - PREDICTED: uncharacterized protein LOC105139156 [Populus euphratica]
8 Hb_027405_010 0.1648457791 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
9 Hb_002203_020 0.1649961657 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000685_020 0.1657026646 - - PREDICTED: long chain acyl-CoA synthetase 4-like [Jatropha curcas]
11 Hb_034688_030 0.1657170616 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
12 Hb_154038_040 0.167477176 - - nutrient reservoir, putative [Ricinus communis]
13 Hb_002518_020 0.1695449383 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
14 Hb_014361_040 0.1700344595 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
15 Hb_004117_020 0.1721382418 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001117_180 0.1741571324 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
17 Hb_022693_090 0.1769134606 - - glycosyltransferase, putative [Ricinus communis]
18 Hb_000028_580 0.1799432808 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
19 Hb_035995_010 0.1812455675 - - -
20 Hb_000032_430 0.1813645536 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_061054_010 Hb_061054_010 Hb_002627_010 Hb_002627_010 Hb_061054_010--Hb_002627_010 Hb_136033_010 Hb_136033_010 Hb_061054_010--Hb_136033_010 Hb_000028_550 Hb_000028_550 Hb_061054_010--Hb_000028_550 Hb_139461_010 Hb_139461_010 Hb_061054_010--Hb_139461_010 Hb_002749_040 Hb_002749_040 Hb_061054_010--Hb_002749_040 Hb_000181_260 Hb_000181_260 Hb_061054_010--Hb_000181_260 Hb_034688_030 Hb_034688_030 Hb_002627_010--Hb_034688_030 Hb_002592_070 Hb_002592_070 Hb_002627_010--Hb_002592_070 Hb_027405_010 Hb_027405_010 Hb_002627_010--Hb_027405_010 Hb_022693_090 Hb_022693_090 Hb_002627_010--Hb_022693_090 Hb_001775_060 Hb_001775_060 Hb_002627_010--Hb_001775_060 Hb_000685_020 Hb_000685_020 Hb_136033_010--Hb_000685_020 Hb_136033_010--Hb_139461_010 Hb_000325_010 Hb_000325_010 Hb_136033_010--Hb_000325_010 Hb_002510_100 Hb_002510_100 Hb_136033_010--Hb_002510_100 Hb_043789_010 Hb_043789_010 Hb_136033_010--Hb_043789_010 Hb_154038_040 Hb_154038_040 Hb_000028_550--Hb_154038_040 Hb_000028_580 Hb_000028_580 Hb_000028_550--Hb_000028_580 Hb_004117_020 Hb_004117_020 Hb_000028_550--Hb_004117_020 Hb_002768_040 Hb_002768_040 Hb_000028_550--Hb_002768_040 Hb_000028_550--Hb_022693_090 Hb_001117_180 Hb_001117_180 Hb_000028_550--Hb_001117_180 Hb_008021_040 Hb_008021_040 Hb_139461_010--Hb_008021_040 Hb_139461_010--Hb_000181_260 Hb_139461_010--Hb_043789_010 Hb_002811_110 Hb_002811_110 Hb_139461_010--Hb_002811_110 Hb_009838_120 Hb_009838_120 Hb_139461_010--Hb_009838_120 Hb_001048_070 Hb_001048_070 Hb_139461_010--Hb_001048_070 Hb_155444_010 Hb_155444_010 Hb_002749_040--Hb_155444_010 Hb_012395_050 Hb_012395_050 Hb_002749_040--Hb_012395_050 Hb_000032_430 Hb_000032_430 Hb_002749_040--Hb_000032_430 Hb_030685_010 Hb_030685_010 Hb_002749_040--Hb_030685_010 Hb_002272_200 Hb_002272_200 Hb_002749_040--Hb_002272_200 Hb_002518_020 Hb_002518_020 Hb_002749_040--Hb_002518_020 Hb_000181_260--Hb_002811_110 Hb_000571_060 Hb_000571_060 Hb_000181_260--Hb_000571_060 Hb_000120_320 Hb_000120_320 Hb_000181_260--Hb_000120_320 Hb_000181_260--Hb_008021_040 Hb_002553_070 Hb_002553_070 Hb_000181_260--Hb_002553_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10442 0.289434 0.208143 1.32362 0 0.0723648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.28307 0.323525

CAGE analysis