Hb_002627_010

Information

Type -
Description -
Location Contig2627: 16634-17059
Sequence    

Annotation

kegg
ID mdm:103417183
description uncharacterized LOC103417183
nr
ID XP_012080682.1
description PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K757
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13786 PE=4 SV=1
Gene Ontology
ID GO:0005509
description PREDICTED: uncharacterized protein LOC105640888

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002627_010 0.0 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
2 Hb_034688_030 0.0943091705 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
3 Hb_002592_070 0.1034191529 - - hypothetical protein VITISV_020993 [Vitis vinifera]
4 Hb_027405_010 0.1065090652 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
5 Hb_022693_090 0.1131458711 - - glycosyltransferase, putative [Ricinus communis]
6 Hb_061054_010 0.119112617 - - hypothetical protein JCGZ_01675 [Jatropha curcas]
7 Hb_001775_060 0.1199981131 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005056_120 0.121352192 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_000000_300 0.1258359118 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
10 Hb_002768_040 0.1258737615 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000453_290 0.1285843185 - - PREDICTED: dr1-associated corepressor-like [Jatropha curcas]
12 Hb_001117_180 0.1297687963 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
13 Hb_003126_120 0.1313974017 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
14 Hb_009225_070 0.1359282669 - - tonoplast intrinsic protein, putative [Ricinus communis]
15 Hb_000028_550 0.1377628697 - - unknown [Medicago truncatula]
16 Hb_000897_010 0.1386626563 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
17 Hb_011314_010 0.1397727846 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
18 Hb_006026_020 0.1457008434 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
19 Hb_007403_100 0.1480947305 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
20 Hb_001360_020 0.1497352559 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]

Gene co-expression network

sample Hb_002627_010 Hb_002627_010 Hb_034688_030 Hb_034688_030 Hb_002627_010--Hb_034688_030 Hb_002592_070 Hb_002592_070 Hb_002627_010--Hb_002592_070 Hb_027405_010 Hb_027405_010 Hb_002627_010--Hb_027405_010 Hb_022693_090 Hb_022693_090 Hb_002627_010--Hb_022693_090 Hb_061054_010 Hb_061054_010 Hb_002627_010--Hb_061054_010 Hb_001775_060 Hb_001775_060 Hb_002627_010--Hb_001775_060 Hb_003126_120 Hb_003126_120 Hb_034688_030--Hb_003126_120 Hb_034688_030--Hb_001775_060 Hb_034688_030--Hb_002592_070 Hb_002000_100 Hb_002000_100 Hb_034688_030--Hb_002000_100 Hb_000453_290 Hb_000453_290 Hb_034688_030--Hb_000453_290 Hb_000468_050 Hb_000468_050 Hb_002592_070--Hb_000468_050 Hb_002592_070--Hb_000453_290 Hb_012553_030 Hb_012553_030 Hb_002592_070--Hb_012553_030 Hb_009225_070 Hb_009225_070 Hb_002592_070--Hb_009225_070 Hb_001117_180 Hb_001117_180 Hb_002592_070--Hb_001117_180 Hb_002592_070--Hb_022693_090 Hb_002384_030 Hb_002384_030 Hb_027405_010--Hb_002384_030 Hb_000076_280 Hb_000076_280 Hb_027405_010--Hb_000076_280 Hb_027405_010--Hb_001117_180 Hb_027405_010--Hb_000453_290 Hb_027400_020 Hb_027400_020 Hb_027405_010--Hb_027400_020 Hb_002370_050 Hb_002370_050 Hb_027405_010--Hb_002370_050 Hb_022693_090--Hb_000453_290 Hb_022693_090--Hb_002384_030 Hb_022693_090--Hb_009225_070 Hb_001360_020 Hb_001360_020 Hb_022693_090--Hb_001360_020 Hb_011314_010 Hb_011314_010 Hb_022693_090--Hb_011314_010 Hb_136033_010 Hb_136033_010 Hb_061054_010--Hb_136033_010 Hb_000028_550 Hb_000028_550 Hb_061054_010--Hb_000028_550 Hb_139461_010 Hb_139461_010 Hb_061054_010--Hb_139461_010 Hb_002749_040 Hb_002749_040 Hb_061054_010--Hb_002749_040 Hb_000181_260 Hb_000181_260 Hb_061054_010--Hb_000181_260 Hb_000705_070 Hb_000705_070 Hb_001775_060--Hb_000705_070 Hb_001775_060--Hb_003126_120 Hb_001775_060--Hb_002592_070 Hb_003582_010 Hb_003582_010 Hb_001775_060--Hb_003582_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.224935 1.57029 0.719301 6.69546 0 0.0679694
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.17906 0.997788

CAGE analysis