Hb_000011_260

Information

Type -
Description -
Location Contig11: 309075-310014
Sequence    

Annotation

kegg
ID rcu:RCOM_0333370
description hypothetical protein
nr
ID XP_002533815.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T6E6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0333370 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02995: 309337-309979
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000011_260 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_020831_060 0.0904933413 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
3 Hb_107658_010 0.1149653783 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X2 [Jatropha curcas]
4 Hb_001369_190 0.120665768 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
5 Hb_004970_100 0.1215733305 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
6 Hb_000270_790 0.1229984083 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
7 Hb_006088_020 0.1408249901 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_004558_060 0.144220569 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
9 Hb_006026_020 0.145244947 - - PREDICTED: BTB/POZ domain-containing protein At5g48800 [Jatropha curcas]
10 Hb_001418_050 0.1458628404 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
11 Hb_002768_040 0.1471701442 - - conserved hypothetical protein [Ricinus communis]
12 Hb_084304_010 0.1503796664 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
13 Hb_001675_290 0.1508514308 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
14 Hb_011120_030 0.1513367921 - - PREDICTED: uncharacterized protein LOC105638239 [Jatropha curcas]
15 Hb_003607_080 0.1515576009 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
16 Hb_005215_050 0.153142022 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
17 Hb_003777_150 0.1537525997 - - PREDICTED: uncharacterized protein LOC105640938 isoform X1 [Jatropha curcas]
18 Hb_005056_120 0.1539344675 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_000206_270 0.1540427881 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
20 Hb_007749_020 0.1562121965 - - receptor-kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000011_260 Hb_000011_260 Hb_020831_060 Hb_020831_060 Hb_000011_260--Hb_020831_060 Hb_107658_010 Hb_107658_010 Hb_000011_260--Hb_107658_010 Hb_001369_190 Hb_001369_190 Hb_000011_260--Hb_001369_190 Hb_004970_100 Hb_004970_100 Hb_000011_260--Hb_004970_100 Hb_000270_790 Hb_000270_790 Hb_000011_260--Hb_000270_790 Hb_006088_020 Hb_006088_020 Hb_000011_260--Hb_006088_020 Hb_020831_060--Hb_004970_100 Hb_019299_020 Hb_019299_020 Hb_020831_060--Hb_019299_020 Hb_000000_300 Hb_000000_300 Hb_020831_060--Hb_000000_300 Hb_000236_210 Hb_000236_210 Hb_020831_060--Hb_000236_210 Hb_003777_150 Hb_003777_150 Hb_020831_060--Hb_003777_150 Hb_150573_010 Hb_150573_010 Hb_107658_010--Hb_150573_010 Hb_107658_010--Hb_001369_190 Hb_036029_020 Hb_036029_020 Hb_107658_010--Hb_036029_020 Hb_004732_070 Hb_004732_070 Hb_107658_010--Hb_004732_070 Hb_004453_060 Hb_004453_060 Hb_107658_010--Hb_004453_060 Hb_004558_060 Hb_004558_060 Hb_001369_190--Hb_004558_060 Hb_001369_190--Hb_006088_020 Hb_002918_270 Hb_002918_270 Hb_001369_190--Hb_002918_270 Hb_003607_080 Hb_003607_080 Hb_001369_190--Hb_003607_080 Hb_005215_050 Hb_005215_050 Hb_001369_190--Hb_005215_050 Hb_000849_030 Hb_000849_030 Hb_001369_190--Hb_000849_030 Hb_006026_020 Hb_006026_020 Hb_004970_100--Hb_006026_020 Hb_004970_100--Hb_003777_150 Hb_005214_050 Hb_005214_050 Hb_004970_100--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_004970_100--Hb_000373_260 Hb_001417_090 Hb_001417_090 Hb_004970_100--Hb_001417_090 Hb_004031_050 Hb_004031_050 Hb_004970_100--Hb_004031_050 Hb_000628_060 Hb_000628_060 Hb_000270_790--Hb_000628_060 Hb_000188_140 Hb_000188_140 Hb_000270_790--Hb_000188_140 Hb_084304_010 Hb_084304_010 Hb_000270_790--Hb_084304_010 Hb_001418_050 Hb_001418_050 Hb_000270_790--Hb_001418_050 Hb_045786_010 Hb_045786_010 Hb_000270_790--Hb_045786_010 Hb_006088_020--Hb_002918_270 Hb_000003_610 Hb_000003_610 Hb_006088_020--Hb_000003_610 Hb_000997_080 Hb_000997_080 Hb_006088_020--Hb_000997_080 Hb_001789_230 Hb_001789_230 Hb_006088_020--Hb_001789_230 Hb_000011_280 Hb_000011_280 Hb_006088_020--Hb_000011_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.12088 4.47325 6.42339 31.0306 0.989077 0.309794
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.42105 2.72867

CAGE analysis