Hb_113739_010

Information

Type -
Description -
Location Contig113739: 192-1218
Sequence    

Annotation

kegg
ID rcu:RCOM_1685860
description protein binding protein, putative
nr
ID KDP37872.1
description hypothetical protein JCGZ_06379 [Jatropha curcas]
swissprot
ID Q9C7A2
description Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1
trembl
ID A0A067KP17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06379 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113739_010 0.0 - - hypothetical protein JCGZ_06379 [Jatropha curcas]
2 Hb_000137_070 0.1531494058 - - PREDICTED: uncharacterized protein LOC105644263 isoform X1 [Jatropha curcas]
3 Hb_182516_010 0.1811596768 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
4 Hb_000390_200 0.184963854 - - PREDICTED: uncharacterized protein LOC105632462 [Jatropha curcas]
5 Hb_068804_150 0.204116063 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000139_330 0.206421485 - - short chain dehydrogenase, putative [Ricinus communis]
7 Hb_002603_130 0.2096114525 - - PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
8 Hb_000445_170 0.2267213181 - - PREDICTED: probable methyltransferase PMT10 [Jatropha curcas]
9 Hb_006501_110 0.2297894728 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X1 [Jatropha curcas]
10 Hb_000032_050 0.2319632833 - - hypothetical protein RCOM_1691130 [Ricinus communis]
11 Hb_000705_300 0.2343361654 - - PREDICTED: probable protein phosphatase 2C 24 [Jatropha curcas]
12 Hb_007479_050 0.2350409932 - - PREDICTED: uncharacterized protein LOC105649412 [Jatropha curcas]
13 Hb_004846_200 0.2372680209 - - PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
14 Hb_001153_150 0.2374121412 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A reductase HMG-CoA synthase 2 [Hevea brasiliensis]
15 Hb_002228_100 0.2396425123 - - calcineurin-like phosphoesterase [Manihot esculenta]
16 Hb_001002_040 0.240465453 - - PREDICTED: ATP-citrate synthase beta chain protein 2 [Gossypium raimondii]
17 Hb_000365_090 0.2444441492 - - receptor protein kinase, putative [Ricinus communis]
18 Hb_002301_290 0.2453006208 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
19 Hb_005271_050 0.2477767539 - - Tubulin beta-8 chain -like protein [Gossypium arboreum]
20 Hb_000982_070 0.2486105801 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_113739_010 Hb_113739_010 Hb_000137_070 Hb_000137_070 Hb_113739_010--Hb_000137_070 Hb_182516_010 Hb_182516_010 Hb_113739_010--Hb_182516_010 Hb_000390_200 Hb_000390_200 Hb_113739_010--Hb_000390_200 Hb_068804_150 Hb_068804_150 Hb_113739_010--Hb_068804_150 Hb_000139_330 Hb_000139_330 Hb_113739_010--Hb_000139_330 Hb_002603_130 Hb_002603_130 Hb_113739_010--Hb_002603_130 Hb_000137_070--Hb_182516_010 Hb_150023_010 Hb_150023_010 Hb_000137_070--Hb_150023_010 Hb_007479_050 Hb_007479_050 Hb_000137_070--Hb_007479_050 Hb_000445_170 Hb_000445_170 Hb_000137_070--Hb_000445_170 Hb_003669_010 Hb_003669_010 Hb_000137_070--Hb_003669_010 Hb_000365_090 Hb_000365_090 Hb_182516_010--Hb_000365_090 Hb_004375_130 Hb_004375_130 Hb_182516_010--Hb_004375_130 Hb_001141_410 Hb_001141_410 Hb_182516_010--Hb_001141_410 Hb_007722_010 Hb_007722_010 Hb_182516_010--Hb_007722_010 Hb_000179_170 Hb_000179_170 Hb_000390_200--Hb_000179_170 Hb_001416_010 Hb_001416_010 Hb_000390_200--Hb_001416_010 Hb_006501_110 Hb_006501_110 Hb_000390_200--Hb_006501_110 Hb_004899_050 Hb_004899_050 Hb_000390_200--Hb_004899_050 Hb_002301_290 Hb_002301_290 Hb_000390_200--Hb_002301_290 Hb_011310_190 Hb_011310_190 Hb_000390_200--Hb_011310_190 Hb_029921_010 Hb_029921_010 Hb_068804_150--Hb_029921_010 Hb_068804_150--Hb_000390_200 Hb_005271_170 Hb_005271_170 Hb_068804_150--Hb_005271_170 Hb_019033_010 Hb_019033_010 Hb_068804_150--Hb_019033_010 Hb_000699_110 Hb_000699_110 Hb_068804_150--Hb_000699_110 Hb_000065_080 Hb_000065_080 Hb_068804_150--Hb_000065_080 Hb_004032_440 Hb_004032_440 Hb_000139_330--Hb_004032_440 Hb_000139_330--Hb_006501_110 Hb_002876_030 Hb_002876_030 Hb_000139_330--Hb_002876_030 Hb_000548_030 Hb_000548_030 Hb_000139_330--Hb_000548_030 Hb_023988_020 Hb_023988_020 Hb_000139_330--Hb_023988_020 Hb_000139_330--Hb_002603_130 Hb_000032_240 Hb_000032_240 Hb_002603_130--Hb_000032_240 Hb_002603_130--Hb_006501_110 Hb_000982_070 Hb_000982_070 Hb_002603_130--Hb_000982_070 Hb_074197_010 Hb_074197_010 Hb_002603_130--Hb_074197_010 Hb_000207_380 Hb_000207_380 Hb_002603_130--Hb_000207_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.0076 0.900117 5.27291 24.6586 10.3839 12.9354
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.3472 7.50171 2.46841 1.10433 7.8442

CAGE analysis