Hb_029921_010

Information

Type -
Description -
Location Contig29921: 2011-5305
Sequence    

Annotation

kegg
ID rcu:RCOM_1680260
description leucine rich repeat receptor kinase, putative (EC:1.3.1.74)
nr
ID XP_002509606.1
description leucine rich repeat receptor kinase, putative [Ricinus communis]
swissprot
ID Q6R2J8
description Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1
trembl
ID B9RBS2
description Leucine rich repeat receptor kinase, putative OS=Ricinus communis GN=RCOM_1680260 PE=4 SV=1
Gene Ontology
ID GO:0005886
description leucine-rich repeat transmembrane protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029921_010 0.0 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
2 Hb_002900_140 0.104463689 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
3 Hb_068804_150 0.1522143399 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000982_110 0.1959718412 - - PREDICTED: chaperonin CPN60-2, mitochondrial-like [Jatropha curcas]
5 Hb_000997_270 0.2050444086 - - PREDICTED: putative ion channel POLLUX-like 2 [Jatropha curcas]
6 Hb_001005_090 0.2062748754 - - PREDICTED: uncharacterized protein LOC105630219 [Jatropha curcas]
7 Hb_005892_060 0.2074331332 - - PREDICTED: uncharacterized protein LOC105632176 isoform X2 [Jatropha curcas]
8 Hb_001002_040 0.2087636217 - - PREDICTED: ATP-citrate synthase beta chain protein 2 [Gossypium raimondii]
9 Hb_005271_170 0.2191588921 - - PREDICTED: tetraspanin-10 isoform X3 [Vitis vinifera]
10 Hb_000065_080 0.2194145279 - - PREDICTED: omega-6 fatty acid desaturase, chloroplastic-like [Nelumbo nucifera]
11 Hb_000197_040 0.2210865963 - - AMP-activated protein kinase, gamma regulatory subunit, putative [Ricinus communis]
12 Hb_003376_100 0.2223230644 - - PREDICTED: uncharacterized protein LOC105642192 [Jatropha curcas]
13 Hb_000268_020 0.2226423531 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002301_280 0.2247203597 transcription factor TF Family: SBP hypothetical protein JCGZ_21462 [Jatropha curcas]
15 Hb_000630_040 0.2253378601 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
16 Hb_000699_110 0.2278135892 - - hypothetical protein POPTR_0013s04180g [Populus trichocarpa]
17 Hb_002226_030 0.2280242474 - - PREDICTED: high affinity nitrate transporter 2.7 [Jatropha curcas]
18 Hb_010381_120 0.2287828825 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
19 Hb_005488_060 0.2302459581 - - cytochrome P450, putative [Ricinus communis]
20 Hb_002054_010 0.2306559133 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_029921_010 Hb_029921_010 Hb_002900_140 Hb_002900_140 Hb_029921_010--Hb_002900_140 Hb_068804_150 Hb_068804_150 Hb_029921_010--Hb_068804_150 Hb_000982_110 Hb_000982_110 Hb_029921_010--Hb_000982_110 Hb_000997_270 Hb_000997_270 Hb_029921_010--Hb_000997_270 Hb_001005_090 Hb_001005_090 Hb_029921_010--Hb_001005_090 Hb_005892_060 Hb_005892_060 Hb_029921_010--Hb_005892_060 Hb_005739_010 Hb_005739_010 Hb_002900_140--Hb_005739_010 Hb_000065_070 Hb_000065_070 Hb_002900_140--Hb_000065_070 Hb_002900_140--Hb_005892_060 Hb_002900_140--Hb_000997_270 Hb_000630_040 Hb_000630_040 Hb_002900_140--Hb_000630_040 Hb_000390_200 Hb_000390_200 Hb_068804_150--Hb_000390_200 Hb_005271_170 Hb_005271_170 Hb_068804_150--Hb_005271_170 Hb_019033_010 Hb_019033_010 Hb_068804_150--Hb_019033_010 Hb_000699_110 Hb_000699_110 Hb_068804_150--Hb_000699_110 Hb_000065_080 Hb_000065_080 Hb_068804_150--Hb_000065_080 Hb_002067_020 Hb_002067_020 Hb_000982_110--Hb_002067_020 Hb_010642_030 Hb_010642_030 Hb_000982_110--Hb_010642_030 Hb_153533_010 Hb_153533_010 Hb_000982_110--Hb_153533_010 Hb_008489_020 Hb_008489_020 Hb_000982_110--Hb_008489_020 Hb_003405_050 Hb_003405_050 Hb_000982_110--Hb_003405_050 Hb_005488_060 Hb_005488_060 Hb_000982_110--Hb_005488_060 Hb_002226_030 Hb_002226_030 Hb_000997_270--Hb_002226_030 Hb_005829_010 Hb_005829_010 Hb_000997_270--Hb_005829_010 Hb_003376_100 Hb_003376_100 Hb_000997_270--Hb_003376_100 Hb_001616_080 Hb_001616_080 Hb_000997_270--Hb_001616_080 Hb_002284_090 Hb_002284_090 Hb_000997_270--Hb_002284_090 Hb_000127_010 Hb_000127_010 Hb_000997_270--Hb_000127_010 Hb_000365_090 Hb_000365_090 Hb_001005_090--Hb_000365_090 Hb_001005_090--Hb_002900_140 Hb_001005_090--Hb_000982_110 Hb_000808_080 Hb_000808_080 Hb_001005_090--Hb_000808_080 Hb_006132_070 Hb_006132_070 Hb_001005_090--Hb_006132_070 Hb_005892_060--Hb_000699_110 Hb_005892_060--Hb_002226_030 Hb_002301_290 Hb_002301_290 Hb_005892_060--Hb_002301_290 Hb_074197_010 Hb_074197_010 Hb_005892_060--Hb_074197_010 Hb_005892_060--Hb_000997_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.88226 0.237408 0.519923 0.462059 1.49389 2.83941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.27644 1.05428 0.165071 0.0975214 1.44167

CAGE analysis