Hb_000630_040

Information

Type transcription factor
Description TF Family: bZIP
Location Contig630: 76620-77688
Sequence    

Annotation

kegg
ID rcu:RCOM_0516810
description DNA binding protein, putative
nr
ID XP_012066490.1
description PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
swissprot
ID Q9SJN0
description Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1
trembl
ID A0A067L6C2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23678 PE=4 SV=1
Gene Ontology
ID GO:0001101
description protein abscisic acid-insensitive 5 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000630_040 0.0 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
2 Hb_002054_010 0.1403522135 - - PREDICTED: heptahelical transmembrane protein 1 [Jatropha curcas]
3 Hb_000630_070 0.1416574472 - - PREDICTED: cell division protein FtsZ homolog 2-1, chloroplastic [Jatropha curcas]
4 Hb_005739_010 0.1610975966 - - hypothetical protein JCGZ_04016 [Jatropha curcas]
5 Hb_101832_010 0.1723045046 - - nitrate transporter, putative [Ricinus communis]
6 Hb_000316_050 0.1746575059 - - enoyl-ACP reductase [Vernicia fordii]
7 Hb_002900_140 0.1762872285 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
8 Hb_000997_270 0.1833727566 - - PREDICTED: putative ion channel POLLUX-like 2 [Jatropha curcas]
9 Hb_000096_090 0.1913615696 - - hypothetical protein JCGZ_12551 [Jatropha curcas]
10 Hb_007672_050 0.1916597414 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
11 Hb_000505_010 0.1921399266 - - PREDICTED: uncharacterized protein LOC105641242 [Jatropha curcas]
12 Hb_002226_030 0.1924291384 - - PREDICTED: high affinity nitrate transporter 2.7 [Jatropha curcas]
13 Hb_002496_050 0.1952690014 - - PREDICTED: uncharacterized protein LOC105630509 [Jatropha curcas]
14 Hb_164926_030 0.1989453023 - - PREDICTED: uncharacterized protein LOC105645602 [Jatropha curcas]
15 Hb_001053_180 0.2004088626 - - protein binding protein, putative [Ricinus communis]
16 Hb_002716_150 0.2026591134 - - starch synthase isoform I [Manihot esculenta]
17 Hb_005892_060 0.2039697876 - - PREDICTED: uncharacterized protein LOC105632176 isoform X2 [Jatropha curcas]
18 Hb_000331_440 0.2043112101 - - hypothetical protein POPTR_0015s10290g [Populus trichocarpa]
19 Hb_000236_070 0.2072280368 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007426_160 0.2072446861 - - -

Gene co-expression network

sample Hb_000630_040 Hb_000630_040 Hb_002054_010 Hb_002054_010 Hb_000630_040--Hb_002054_010 Hb_000630_070 Hb_000630_070 Hb_000630_040--Hb_000630_070 Hb_005739_010 Hb_005739_010 Hb_000630_040--Hb_005739_010 Hb_101832_010 Hb_101832_010 Hb_000630_040--Hb_101832_010 Hb_000316_050 Hb_000316_050 Hb_000630_040--Hb_000316_050 Hb_002900_140 Hb_002900_140 Hb_000630_040--Hb_002900_140 Hb_000331_440 Hb_000331_440 Hb_002054_010--Hb_000331_440 Hb_001053_180 Hb_001053_180 Hb_002054_010--Hb_001053_180 Hb_002054_010--Hb_000316_050 Hb_000096_090 Hb_000096_090 Hb_002054_010--Hb_000096_090 Hb_002054_010--Hb_101832_010 Hb_164926_030 Hb_164926_030 Hb_000630_070--Hb_164926_030 Hb_002496_050 Hb_002496_050 Hb_000630_070--Hb_002496_050 Hb_007672_050 Hb_007672_050 Hb_000630_070--Hb_007672_050 Hb_000630_070--Hb_000096_090 Hb_002253_070 Hb_002253_070 Hb_000630_070--Hb_002253_070 Hb_002681_020 Hb_002681_020 Hb_000630_070--Hb_002681_020 Hb_002716_150 Hb_002716_150 Hb_005739_010--Hb_002716_150 Hb_031042_040 Hb_031042_040 Hb_005739_010--Hb_031042_040 Hb_005739_010--Hb_002900_140 Hb_135810_010 Hb_135810_010 Hb_005739_010--Hb_135810_010 Hb_000065_070 Hb_000065_070 Hb_005739_010--Hb_000065_070 Hb_002226_030 Hb_002226_030 Hb_101832_010--Hb_002226_030 Hb_000345_390 Hb_000345_390 Hb_101832_010--Hb_000345_390 Hb_116349_100 Hb_116349_100 Hb_101832_010--Hb_116349_100 Hb_101832_010--Hb_001053_180 Hb_101832_010--Hb_000630_070 Hb_000316_050--Hb_000096_090 Hb_000236_070 Hb_000236_070 Hb_000316_050--Hb_000236_070 Hb_001959_070 Hb_001959_070 Hb_000316_050--Hb_001959_070 Hb_000648_110 Hb_000648_110 Hb_000316_050--Hb_000648_110 Hb_000505_010 Hb_000505_010 Hb_000316_050--Hb_000505_010 Hb_000023_140 Hb_000023_140 Hb_000316_050--Hb_000023_140 Hb_029921_010 Hb_029921_010 Hb_002900_140--Hb_029921_010 Hb_002900_140--Hb_000065_070 Hb_005892_060 Hb_005892_060 Hb_002900_140--Hb_005892_060 Hb_000997_270 Hb_000997_270 Hb_002900_140--Hb_000997_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.82737 0.165462 0.450298 0.126426 1.24178 2.14273
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.32821 0.71363 1.7069 0.144882 1.53791

CAGE analysis