Hb_010812_090

Information

Type -
Description -
Location Contig10812: 57358-60821
Sequence    

Annotation

kegg
ID cic:CICLE_v10031396mg
description hypothetical protein
nr
ID XP_012091113.1
description PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
swissprot
ID Q39030
description Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana GN=ATPK2 PE=1 SV=2
trembl
ID A0A067JNP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03296 PE=4 SV=1
Gene Ontology
ID GO:0043229
description serine threonine-protein kinase 2 19-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02500: 57960-58391 , PASA_asmbl_02501: 58417-59739
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010812_090 0.0 - - PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
2 Hb_006502_040 0.1623336609 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
3 Hb_003992_120 0.2312570499 - - hypothetical protein MTR_6g089560 [Medicago truncatula]
4 Hb_010128_110 0.2583805613 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
5 Hb_000567_280 0.2831366431 - - PREDICTED: uncharacterized protein At4g06598-like [Populus euphratica]
6 Hb_000861_050 0.2851274243 - - PREDICTED: transcription elongation factor SPT6-like isoform X1 [Populus euphratica]
7 Hb_074197_010 0.286989896 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
8 Hb_001391_020 0.2881060928 - - Arylacetamide deacetylase, putative [Ricinus communis]
9 Hb_002835_220 0.2894844909 - - PREDICTED: MATE efflux family protein 7 [Vitis vinifera]
10 Hb_001631_080 0.2924470766 - - PREDICTED: importin-5-like [Populus euphratica]
11 Hb_002259_050 0.2961473627 - - unnamed protein product [Vitis vinifera]
12 Hb_106029_010 0.2984387449 - - Transcription factor ICE1, putative [Ricinus communis]
13 Hb_000922_180 0.2991404784 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 [Jatropha curcas]
14 Hb_000599_050 0.3012041185 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
15 Hb_002233_110 0.3029777114 - - PREDICTED: nuclear transcription factor Y subunit B-3-like [Jatropha curcas]
16 Hb_008031_020 0.3059077427 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
17 Hb_001831_020 0.3059154695 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
18 Hb_000058_220 0.3059321493 - - hypothetical protein, partial [Staphylococcus aureus]
19 Hb_019677_010 0.3059383776 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
20 Hb_048125_010 0.3060226021 - - PREDICTED: uncharacterized protein LOC104104928 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_010812_090 Hb_010812_090 Hb_006502_040 Hb_006502_040 Hb_010812_090--Hb_006502_040 Hb_003992_120 Hb_003992_120 Hb_010812_090--Hb_003992_120 Hb_010128_110 Hb_010128_110 Hb_010812_090--Hb_010128_110 Hb_000567_280 Hb_000567_280 Hb_010812_090--Hb_000567_280 Hb_000861_050 Hb_000861_050 Hb_010812_090--Hb_000861_050 Hb_074197_010 Hb_074197_010 Hb_010812_090--Hb_074197_010 Hb_006502_040--Hb_000861_050 Hb_003893_080 Hb_003893_080 Hb_006502_040--Hb_003893_080 Hb_006502_040--Hb_000567_280 Hb_159191_010 Hb_159191_010 Hb_006502_040--Hb_159191_010 Hb_002259_050 Hb_002259_050 Hb_006502_040--Hb_002259_050 Hb_002843_190 Hb_002843_190 Hb_003992_120--Hb_002843_190 Hb_035905_010 Hb_035905_010 Hb_003992_120--Hb_035905_010 Hb_003992_120--Hb_010128_110 Hb_001141_400 Hb_001141_400 Hb_003992_120--Hb_001141_400 Hb_026766_010 Hb_026766_010 Hb_003992_120--Hb_026766_010 Hb_010128_110--Hb_002843_190 Hb_001631_080 Hb_001631_080 Hb_010128_110--Hb_001631_080 Hb_000175_040 Hb_000175_040 Hb_010128_110--Hb_000175_040 Hb_010128_110--Hb_001141_400 Hb_028365_010 Hb_028365_010 Hb_010128_110--Hb_028365_010 Hb_003756_010 Hb_003756_010 Hb_010128_110--Hb_003756_010 Hb_003050_070 Hb_003050_070 Hb_000567_280--Hb_003050_070 Hb_000567_280--Hb_159191_010 Hb_104010_010 Hb_104010_010 Hb_000567_280--Hb_104010_010 Hb_000091_100 Hb_000091_100 Hb_000567_280--Hb_000091_100 Hb_001741_090 Hb_001741_090 Hb_000567_280--Hb_001741_090 Hb_002835_220 Hb_002835_220 Hb_000567_280--Hb_002835_220 Hb_005410_030 Hb_005410_030 Hb_000861_050--Hb_005410_030 Hb_000052_010 Hb_000052_010 Hb_000861_050--Hb_000052_010 Hb_003023_050 Hb_003023_050 Hb_000861_050--Hb_003023_050 Hb_004055_060 Hb_004055_060 Hb_000861_050--Hb_004055_060 Hb_000714_010 Hb_000714_010 Hb_000861_050--Hb_000714_010 Hb_000005_030 Hb_000005_030 Hb_000861_050--Hb_000005_030 Hb_002603_130 Hb_002603_130 Hb_074197_010--Hb_002603_130 Hb_005892_060 Hb_005892_060 Hb_074197_010--Hb_005892_060 Hb_019033_010 Hb_019033_010 Hb_074197_010--Hb_019033_010 Hb_002301_290 Hb_002301_290 Hb_074197_010--Hb_002301_290 Hb_026428_010 Hb_026428_010 Hb_074197_010--Hb_026428_010 Hb_002471_100 Hb_002471_100 Hb_074197_010--Hb_002471_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
102.629 1.59241 0.640239 1.405 0.525731 15.0815
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
226.766 42.1661 7.53255 0.416841 0.508354

CAGE analysis