Hb_003893_080

Information

Type -
Description -
Location Contig3893: 76625-77197
Sequence    

Annotation

kegg
ID rcu:RCOM_1431320
description hypothetical protein
nr
ID XP_002512362.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RF43
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431320 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003893_080 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_006502_040 0.1922101425 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
3 Hb_002431_060 0.2001016159 - - -
4 Hb_000714_010 0.2061942596 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
5 Hb_000861_050 0.225897211 - - PREDICTED: transcription elongation factor SPT6-like isoform X1 [Populus euphratica]
6 Hb_000599_050 0.2289883057 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]
7 Hb_003592_070 0.2292084167 - - -
8 Hb_000250_010 0.2303843154 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
9 Hb_032660_020 0.23342382 - - PREDICTED: F-box protein At5g49610-like [Jatropha curcas]
10 Hb_000329_660 0.2354309045 - - PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic [Jatropha curcas]
11 Hb_008864_060 0.2369916827 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
12 Hb_001799_040 0.2432297321 - - -
13 Hb_002028_060 0.2484817696 - - -
14 Hb_003050_070 0.2491685067 - - conserved hypothetical protein [Ricinus communis]
15 Hb_159191_010 0.2504539177 - - protease inhibitor protein [Hevea brasiliensis]
16 Hb_001671_060 0.2512907839 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
17 Hb_002918_300 0.2530401736 - - -
18 Hb_004129_150 0.2533349236 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
19 Hb_005410_030 0.2622987653 - - glutaredoxin 2 [Hevea brasiliensis]
20 Hb_011671_400 0.2650646794 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]

Gene co-expression network

sample Hb_003893_080 Hb_003893_080 Hb_006502_040 Hb_006502_040 Hb_003893_080--Hb_006502_040 Hb_002431_060 Hb_002431_060 Hb_003893_080--Hb_002431_060 Hb_000714_010 Hb_000714_010 Hb_003893_080--Hb_000714_010 Hb_000861_050 Hb_000861_050 Hb_003893_080--Hb_000861_050 Hb_000599_050 Hb_000599_050 Hb_003893_080--Hb_000599_050 Hb_003592_070 Hb_003592_070 Hb_003893_080--Hb_003592_070 Hb_010812_090 Hb_010812_090 Hb_006502_040--Hb_010812_090 Hb_006502_040--Hb_000861_050 Hb_000567_280 Hb_000567_280 Hb_006502_040--Hb_000567_280 Hb_159191_010 Hb_159191_010 Hb_006502_040--Hb_159191_010 Hb_002259_050 Hb_002259_050 Hb_006502_040--Hb_002259_050 Hb_081207_010 Hb_081207_010 Hb_002431_060--Hb_081207_010 Hb_002918_300 Hb_002918_300 Hb_002431_060--Hb_002918_300 Hb_002431_060--Hb_002259_050 Hb_032660_020 Hb_032660_020 Hb_002431_060--Hb_032660_020 Hb_000445_220 Hb_000445_220 Hb_002431_060--Hb_000445_220 Hb_002228_090 Hb_002228_090 Hb_002431_060--Hb_002228_090 Hb_003050_070 Hb_003050_070 Hb_000714_010--Hb_003050_070 Hb_000250_010 Hb_000250_010 Hb_000714_010--Hb_000250_010 Hb_003211_050 Hb_003211_050 Hb_000714_010--Hb_003211_050 Hb_010166_020 Hb_010166_020 Hb_000714_010--Hb_010166_020 Hb_003777_230 Hb_003777_230 Hb_000714_010--Hb_003777_230 Hb_149683_010 Hb_149683_010 Hb_000714_010--Hb_149683_010 Hb_005410_030 Hb_005410_030 Hb_000861_050--Hb_005410_030 Hb_000052_010 Hb_000052_010 Hb_000861_050--Hb_000052_010 Hb_003023_050 Hb_003023_050 Hb_000861_050--Hb_003023_050 Hb_004055_060 Hb_004055_060 Hb_000861_050--Hb_004055_060 Hb_000861_050--Hb_000714_010 Hb_000005_030 Hb_000005_030 Hb_000861_050--Hb_000005_030 Hb_000599_050--Hb_000861_050 Hb_002235_230 Hb_002235_230 Hb_000599_050--Hb_002235_230 Hb_029584_140 Hb_029584_140 Hb_000599_050--Hb_029584_140 Hb_006816_440 Hb_006816_440 Hb_000599_050--Hb_006816_440 Hb_000599_050--Hb_005410_030 Hb_000603_210 Hb_000603_210 Hb_000599_050--Hb_000603_210 Hb_000032_350 Hb_000032_350 Hb_003592_070--Hb_000032_350 Hb_003592_070--Hb_032660_020 Hb_000329_660 Hb_000329_660 Hb_003592_070--Hb_000329_660 Hb_001101_010 Hb_001101_010 Hb_003592_070--Hb_001101_010 Hb_004129_150 Hb_004129_150 Hb_003592_070--Hb_004129_150 Hb_003592_070--Hb_003050_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.558269 0.0954836 0 0 0 0.0415227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.08219 1.02051 0.295373 0 0

CAGE analysis