Hb_002431_060

Information

Type -
Description -
Location Contig2431: 99223-100771
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002431_060 0.0 - - -
2 Hb_081207_010 0.1653045888 - - hypothetical protein JCGZ_17195 [Jatropha curcas]
3 Hb_002918_300 0.1714974495 - - -
4 Hb_002259_050 0.1863982046 - - unnamed protein product [Vitis vinifera]
5 Hb_032660_020 0.1909907144 - - PREDICTED: F-box protein At5g49610-like [Jatropha curcas]
6 Hb_000445_220 0.1955447052 - - -
7 Hb_002228_090 0.199502928 - - hypothetical protein POPTR_0006s23560g [Populus trichocarpa]
8 Hb_003893_080 0.2001016159 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006922_040 0.2060197758 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
10 Hb_000714_010 0.2107413532 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
11 Hb_175450_010 0.216080547 - - -
12 Hb_000861_050 0.2173246781 - - PREDICTED: transcription elongation factor SPT6-like isoform X1 [Populus euphratica]
13 Hb_000501_020 0.2253005923 - - PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
14 Hb_001799_040 0.2307815288 - - -
15 Hb_006502_040 0.2370768595 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
16 Hb_001101_010 0.2384609649 - - hypothetical protein POPTR_0004s18730g [Populus trichocarpa]
17 Hb_001425_110 0.2437613713 - - hypothetical protein Csa_6G106200 [Cucumis sativus]
18 Hb_000373_300 0.247065903 - - hypothetical protein F775_20382 [Aegilops tauschii]
19 Hb_000398_030 0.24784901 - - conserved hypothetical protein [Ricinus communis]
20 Hb_159191_010 0.2544482229 - - protease inhibitor protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_002431_060 Hb_002431_060 Hb_081207_010 Hb_081207_010 Hb_002431_060--Hb_081207_010 Hb_002918_300 Hb_002918_300 Hb_002431_060--Hb_002918_300 Hb_002259_050 Hb_002259_050 Hb_002431_060--Hb_002259_050 Hb_032660_020 Hb_032660_020 Hb_002431_060--Hb_032660_020 Hb_000445_220 Hb_000445_220 Hb_002431_060--Hb_000445_220 Hb_002228_090 Hb_002228_090 Hb_002431_060--Hb_002228_090 Hb_081207_010--Hb_000445_220 Hb_081207_010--Hb_002259_050 Hb_006922_040 Hb_006922_040 Hb_081207_010--Hb_006922_040 Hb_081207_010--Hb_002228_090 Hb_175450_010 Hb_175450_010 Hb_081207_010--Hb_175450_010 Hb_001101_010 Hb_001101_010 Hb_002918_300--Hb_001101_010 Hb_000714_010 Hb_000714_010 Hb_002918_300--Hb_000714_010 Hb_001799_040 Hb_001799_040 Hb_002918_300--Hb_001799_040 Hb_003376_210 Hb_003376_210 Hb_002918_300--Hb_003376_210 Hb_002918_300--Hb_032660_020 Hb_002259_050--Hb_175450_010 Hb_002259_050--Hb_000445_220 Hb_002259_050--Hb_006922_040 Hb_002259_050--Hb_002228_090 Hb_000387_060 Hb_000387_060 Hb_032660_020--Hb_000387_060 Hb_032660_020--Hb_000714_010 Hb_003592_070 Hb_003592_070 Hb_032660_020--Hb_003592_070 Hb_032660_020--Hb_001101_010 Hb_003050_070 Hb_003050_070 Hb_032660_020--Hb_003050_070 Hb_000445_220--Hb_006922_040 Hb_000501_020 Hb_000501_020 Hb_000445_220--Hb_000501_020 Hb_000445_220--Hb_002228_090 Hb_002228_090--Hb_175450_010 Hb_000184_190 Hb_000184_190 Hb_002228_090--Hb_000184_190 Hb_002228_090--Hb_006922_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.435817 0 0 0 0.0328383 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.979691 1.06648 0.106317 0 0

CAGE analysis