Hb_001799_040

Information

Type -
Description -
Location Contig1799: 43962-45277
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001799_040 0.0 - - -
2 Hb_000398_030 0.1448614449 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000544_110 0.1687447454 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
4 Hb_002918_300 0.1708361926 - - -
5 Hb_000032_350 0.1818975714 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007809_090 0.1877539202 - - protease inhibitor protein [Hevea brasiliensis]
7 Hb_001922_080 0.191338048 - - Tellurite resistance protein tehA, putative [Ricinus communis]
8 Hb_000696_220 0.1953127827 - - PREDICTED: uncharacterized protein LOC105647113 [Jatropha curcas]
9 Hb_005137_020 0.1953171609 - - PREDICTED: uncharacterized protein LOC101759641 [Setaria italica]
10 Hb_006469_060 0.196361746 - - hypothetical protein POPTR_0005s16470g [Populus trichocarpa]
11 Hb_000714_010 0.1963720754 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
12 Hb_005410_030 0.1976310027 - - glutaredoxin 2 [Hevea brasiliensis]
13 Hb_007416_220 0.1979272594 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
14 Hb_000861_050 0.1982007861 - - PREDICTED: transcription elongation factor SPT6-like isoform X1 [Populus euphratica]
15 Hb_000175_130 0.2022653988 - - PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Jatropha curcas]
16 Hb_000270_730 0.2032670321 - - PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Jatropha curcas]
17 Hb_001616_020 0.209028792 - - PREDICTED: wound-induced basic protein [Jatropha curcas]
18 Hb_000580_160 0.2090970875 - - Nitrate transporter 1.5 [Morus notabilis]
19 Hb_150299_030 0.2100069115 - - conserved hypothetical protein [Ricinus communis]
20 Hb_010172_100 0.2107912125 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Populus euphratica]

Gene co-expression network

sample Hb_001799_040 Hb_001799_040 Hb_000398_030 Hb_000398_030 Hb_001799_040--Hb_000398_030 Hb_000544_110 Hb_000544_110 Hb_001799_040--Hb_000544_110 Hb_002918_300 Hb_002918_300 Hb_001799_040--Hb_002918_300 Hb_000032_350 Hb_000032_350 Hb_001799_040--Hb_000032_350 Hb_007809_090 Hb_007809_090 Hb_001799_040--Hb_007809_090 Hb_001922_080 Hb_001922_080 Hb_001799_040--Hb_001922_080 Hb_000270_730 Hb_000270_730 Hb_000398_030--Hb_000270_730 Hb_000398_030--Hb_001922_080 Hb_001842_080 Hb_001842_080 Hb_000398_030--Hb_001842_080 Hb_000398_030--Hb_000032_350 Hb_001373_100 Hb_001373_100 Hb_000398_030--Hb_001373_100 Hb_005137_020 Hb_005137_020 Hb_000544_110--Hb_005137_020 Hb_072912_020 Hb_072912_020 Hb_000544_110--Hb_072912_020 Hb_001102_250 Hb_001102_250 Hb_000544_110--Hb_001102_250 Hb_078633_010 Hb_078633_010 Hb_000544_110--Hb_078633_010 Hb_008066_040 Hb_008066_040 Hb_000544_110--Hb_008066_040 Hb_005908_040 Hb_005908_040 Hb_000544_110--Hb_005908_040 Hb_001101_010 Hb_001101_010 Hb_002918_300--Hb_001101_010 Hb_000714_010 Hb_000714_010 Hb_002918_300--Hb_000714_010 Hb_002431_060 Hb_002431_060 Hb_002918_300--Hb_002431_060 Hb_003376_210 Hb_003376_210 Hb_002918_300--Hb_003376_210 Hb_032660_020 Hb_032660_020 Hb_002918_300--Hb_032660_020 Hb_000696_220 Hb_000696_220 Hb_000032_350--Hb_000696_220 Hb_000853_240 Hb_000853_240 Hb_000032_350--Hb_000853_240 Hb_000963_030 Hb_000963_030 Hb_000032_350--Hb_000963_030 Hb_003198_010 Hb_003198_010 Hb_000032_350--Hb_003198_010 Hb_007943_140 Hb_007943_140 Hb_000032_350--Hb_007943_140 Hb_011689_050 Hb_011689_050 Hb_000032_350--Hb_011689_050 Hb_000559_080 Hb_000559_080 Hb_007809_090--Hb_000559_080 Hb_159191_010 Hb_159191_010 Hb_007809_090--Hb_159191_010 Hb_007120_070 Hb_007120_070 Hb_007809_090--Hb_007120_070 Hb_003020_310 Hb_003020_310 Hb_007809_090--Hb_003020_310 Hb_007416_220 Hb_007416_220 Hb_007809_090--Hb_007416_220 Hb_001922_080--Hb_001842_080 Hb_010172_100 Hb_010172_100 Hb_001922_080--Hb_010172_100 Hb_001922_080--Hb_000270_730 Hb_000316_100 Hb_000316_100 Hb_001922_080--Hb_000316_100 Hb_001922_080--Hb_000544_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.0455 0.334005 0.927931 0.926723 2.13531 1.90527
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.8036 34.6064 5.42511 0.652569 0.153917

CAGE analysis