Hb_007809_090

Information

Type -
Description -
Location Contig7809: 80901-81296
Sequence    

Annotation

kegg
ID aly:ARALYDRAFT_482903
description hypothetical protein
nr
ID ABZ88804.1
description protease inhibitor protein [Hevea brasiliensis]
swissprot
ID Q6XNP7
description Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2
trembl
ID B3FNP9
description Protease inhibitor protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005618
description protease inhibitor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57957: 80708-81444
cDNA
(Sanger)
(ID:Location)		 001_M13.ab1: 80717-81261 , 004_N02.ab1: 80751-81261 , 006_A12.ab1: 80792-81444 , 018_J18.ab1: 80744-81261 , 018_P05.ab1: 80716-81261 , 020_C05.ab1: 80717-81261 , 023_E08.ab1: 80799-81263 , 026_M06.ab1: 80715-81261 , 033_C13.ab1: 80717-81261 , 033_D21.ab1: 80788-81261 , 033_P15.ab1: 80738-81256 , 041_B22.ab1: 80718-81263 , 042_F14.ab1: 80715-81261 , 043_C03.ab1: 80748-81262 , 044_I08.ab1: 80750-81315

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007809_090 0.0 - - protease inhibitor protein [Hevea brasiliensis]
2 Hb_000559_080 0.1568350371 - - PREDICTED: calcineurin B-like protein 4 [Jatropha curcas]
3 Hb_159191_010 0.1636453266 - - protease inhibitor protein [Hevea brasiliensis]
4 Hb_007120_070 0.1777639041 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
5 Hb_003020_310 0.1829686358 - - glycosyltransferase, putative [Ricinus communis]
6 Hb_007416_220 0.1841447987 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
7 Hb_001799_040 0.1877539202 - - -
8 Hb_000922_170 0.195800542 - - PREDICTED: uncharacterized protein LOC105640383 [Jatropha curcas]
9 Hb_000035_430 0.1962196187 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
10 Hb_089100_030 0.196563333 - - -
11 Hb_000207_380 0.2011813705 - - sucrose transporter 6 [Hevea brasiliensis]
12 Hb_000544_110 0.2041484639 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
13 Hb_023214_010 0.2047451224 - - aberrant lateral root formation 1 family protein [Populus trichocarpa]
14 Hb_001671_060 0.2095326385 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
15 Hb_000384_130 0.2104550129 - - uridylate kinase plant, putative [Ricinus communis]
16 Hb_164926_020 0.2120237806 - - PREDICTED: uncharacterized protein LOC105645601 [Jatropha curcas]
17 Hb_007140_020 0.2163065062 - - hypothetical protein CICLE_v10008419mg [Citrus clementina]
18 Hb_001035_040 0.2165965187 - - unnamed protein product [Coffea canephora]
19 Hb_089100_020 0.2176800848 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
20 Hb_000526_020 0.2210834185 - - thioredoxin-like family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_007809_090 Hb_007809_090 Hb_000559_080 Hb_000559_080 Hb_007809_090--Hb_000559_080 Hb_159191_010 Hb_159191_010 Hb_007809_090--Hb_159191_010 Hb_007120_070 Hb_007120_070 Hb_007809_090--Hb_007120_070 Hb_003020_310 Hb_003020_310 Hb_007809_090--Hb_003020_310 Hb_007416_220 Hb_007416_220 Hb_007809_090--Hb_007416_220 Hb_001799_040 Hb_001799_040 Hb_007809_090--Hb_001799_040 Hb_000526_020 Hb_000526_020 Hb_000559_080--Hb_000526_020 Hb_000161_050 Hb_000161_050 Hb_000559_080--Hb_000161_050 Hb_000559_080--Hb_007416_220 Hb_006469_060 Hb_006469_060 Hb_000559_080--Hb_006469_060 Hb_000559_080--Hb_007120_070 Hb_003050_070 Hb_003050_070 Hb_159191_010--Hb_003050_070 Hb_000567_280 Hb_000567_280 Hb_159191_010--Hb_000567_280 Hb_001671_060 Hb_001671_060 Hb_159191_010--Hb_001671_060 Hb_001507_070 Hb_001507_070 Hb_159191_010--Hb_001507_070 Hb_000714_010 Hb_000714_010 Hb_159191_010--Hb_000714_010 Hb_007120_070--Hb_003020_310 Hb_029584_140 Hb_029584_140 Hb_007120_070--Hb_029584_140 Hb_000178_110 Hb_000178_110 Hb_007120_070--Hb_000178_110 Hb_003038_180 Hb_003038_180 Hb_007120_070--Hb_003038_180 Hb_000062_580 Hb_000062_580 Hb_007120_070--Hb_000062_580 Hb_001035_040 Hb_001035_040 Hb_007120_070--Hb_001035_040 Hb_078633_010 Hb_078633_010 Hb_003020_310--Hb_078633_010 Hb_000077_410 Hb_000077_410 Hb_003020_310--Hb_000077_410 Hb_023214_010 Hb_023214_010 Hb_003020_310--Hb_023214_010 Hb_148121_010 Hb_148121_010 Hb_003020_310--Hb_148121_010 Hb_003020_310--Hb_001035_040 Hb_000085_200 Hb_000085_200 Hb_007416_220--Hb_000085_200 Hb_000922_170 Hb_000922_170 Hb_007416_220--Hb_000922_170 Hb_004958_050 Hb_004958_050 Hb_007416_220--Hb_004958_050 Hb_000188_130 Hb_000188_130 Hb_007416_220--Hb_000188_130 Hb_000144_110 Hb_000144_110 Hb_007416_220--Hb_000144_110 Hb_000046_260 Hb_000046_260 Hb_007416_220--Hb_000046_260 Hb_000398_030 Hb_000398_030 Hb_001799_040--Hb_000398_030 Hb_000544_110 Hb_000544_110 Hb_001799_040--Hb_000544_110 Hb_002918_300 Hb_002918_300 Hb_001799_040--Hb_002918_300 Hb_000032_350 Hb_000032_350 Hb_001799_040--Hb_000032_350 Hb_001922_080 Hb_001922_080 Hb_001799_040--Hb_001922_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4840.99 26.2221 311.729 1535.53 834.268 213.133
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6264.51 6661.22 2211.09 175.983 170.578

CAGE analysis