Hb_000559_080

Information

Type -
Description -
Location Contig559: 151060-153426
Sequence    

Annotation

kegg
ID rcu:RCOM_1692320
description calcineurin B, putative
nr
ID XP_012087187.1
description PREDICTED: calcineurin B-like protein 4 [Jatropha curcas]
swissprot
ID Q7FZF1
description Calcineurin B-like protein 5 OS=Arabidopsis thaliana GN=CBL5 PE=1 SV=3
trembl
ID A0A067JMS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20427 PE=4 SV=1
Gene Ontology
ID GO:0005622
description calcineurin b-like protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48662: 151008-153412
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000559_080 0.0 - - PREDICTED: calcineurin B-like protein 4 [Jatropha curcas]
2 Hb_000526_020 0.1536254 - - thioredoxin-like family protein [Hevea brasiliensis]
3 Hb_007809_090 0.1568350371 - - protease inhibitor protein [Hevea brasiliensis]
4 Hb_000161_050 0.1575565005 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007416_220 0.1627239095 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
6 Hb_006469_060 0.1645194994 - - hypothetical protein POPTR_0005s16470g [Populus trichocarpa]
7 Hb_007120_070 0.1658083331 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
8 Hb_010166_020 0.1663205414 transcription factor TF Family: NF-YC ccaat-binding transcription factor, putative [Ricinus communis]
9 Hb_000046_260 0.1722837582 - - acyl carrier protein, putative [Ricinus communis]
10 Hb_001153_080 0.1731838441 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL19 [Jatropha curcas]
11 Hb_001486_260 0.1753399806 - - PREDICTED: uncharacterized protein LOC105632604 [Jatropha curcas]
12 Hb_000025_290 0.1776457604 - - Uncharacterized protein TCM_031320 [Theobroma cacao]
13 Hb_001266_050 0.1784555155 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like isoform X2 [Elaeis guineensis]
14 Hb_004724_140 0.1785216392 transcription factor TF Family: NF-YB PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
15 Hb_001252_140 0.1785498069 - - catalytic, putative [Ricinus communis]
16 Hb_000085_200 0.1786264209 - - ATP synthase subunit H protein [Hevea brasiliensis]
17 Hb_005615_070 0.1804056398 - - Rab7 [Hevea brasiliensis]
18 Hb_000922_170 0.1807499435 - - PREDICTED: uncharacterized protein LOC105640383 [Jatropha curcas]
19 Hb_011689_050 0.1827168612 - - hypothetical protein POPTR_0008s20290g [Populus trichocarpa]
20 Hb_009851_100 0.1839205693 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A-like [Jatropha curcas]

Gene co-expression network

sample Hb_000559_080 Hb_000559_080 Hb_000526_020 Hb_000526_020 Hb_000559_080--Hb_000526_020 Hb_007809_090 Hb_007809_090 Hb_000559_080--Hb_007809_090 Hb_000161_050 Hb_000161_050 Hb_000559_080--Hb_000161_050 Hb_007416_220 Hb_007416_220 Hb_000559_080--Hb_007416_220 Hb_006469_060 Hb_006469_060 Hb_000559_080--Hb_006469_060 Hb_007120_070 Hb_007120_070 Hb_000559_080--Hb_007120_070 Hb_000062_580 Hb_000062_580 Hb_000526_020--Hb_000062_580 Hb_001266_050 Hb_001266_050 Hb_000526_020--Hb_001266_050 Hb_000052_010 Hb_000052_010 Hb_000526_020--Hb_000052_010 Hb_000005_030 Hb_000005_030 Hb_000526_020--Hb_000005_030 Hb_003038_180 Hb_003038_180 Hb_000526_020--Hb_003038_180 Hb_000184_180 Hb_000184_180 Hb_000526_020--Hb_000184_180 Hb_159191_010 Hb_159191_010 Hb_007809_090--Hb_159191_010 Hb_007809_090--Hb_007120_070 Hb_003020_310 Hb_003020_310 Hb_007809_090--Hb_003020_310 Hb_007809_090--Hb_007416_220 Hb_001799_040 Hb_001799_040 Hb_007809_090--Hb_001799_040 Hb_002781_020 Hb_002781_020 Hb_000161_050--Hb_002781_020 Hb_001153_080 Hb_001153_080 Hb_000161_050--Hb_001153_080 Hb_000212_260 Hb_000212_260 Hb_000161_050--Hb_000212_260 Hb_011689_050 Hb_011689_050 Hb_000161_050--Hb_011689_050 Hb_010172_030 Hb_010172_030 Hb_000161_050--Hb_010172_030 Hb_009851_100 Hb_009851_100 Hb_000161_050--Hb_009851_100 Hb_000085_200 Hb_000085_200 Hb_007416_220--Hb_000085_200 Hb_000922_170 Hb_000922_170 Hb_007416_220--Hb_000922_170 Hb_004958_050 Hb_004958_050 Hb_007416_220--Hb_004958_050 Hb_000188_130 Hb_000188_130 Hb_007416_220--Hb_000188_130 Hb_000144_110 Hb_000144_110 Hb_007416_220--Hb_000144_110 Hb_000046_260 Hb_000046_260 Hb_007416_220--Hb_000046_260 Hb_000580_160 Hb_000580_160 Hb_006469_060--Hb_000580_160 Hb_001252_140 Hb_001252_140 Hb_006469_060--Hb_001252_140 Hb_007747_130 Hb_007747_130 Hb_006469_060--Hb_007747_130 Hb_005615_070 Hb_005615_070 Hb_006469_060--Hb_005615_070 Hb_001621_180 Hb_001621_180 Hb_006469_060--Hb_001621_180 Hb_012779_110 Hb_012779_110 Hb_006469_060--Hb_012779_110 Hb_007120_070--Hb_003020_310 Hb_029584_140 Hb_029584_140 Hb_007120_070--Hb_029584_140 Hb_000178_110 Hb_000178_110 Hb_007120_070--Hb_000178_110 Hb_007120_070--Hb_003038_180 Hb_007120_070--Hb_000062_580 Hb_001035_040 Hb_001035_040 Hb_007120_070--Hb_001035_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.4244 0.258243 1.27055 5.91945 10.8427 4.09327
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.0139 32.4338 9.75862 0.685649 2.29674

CAGE analysis