Hb_000445_220

Information

Type -
Description -
Location Contig445: 228405-231255
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000445_220 0.0 - - -
2 Hb_006922_040 0.0801119461 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_081207_010 0.0914254105 - - hypothetical protein JCGZ_17195 [Jatropha curcas]
4 Hb_000501_020 0.1303553221 - - PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
5 Hb_002259_050 0.1496461217 - - unnamed protein product [Vitis vinifera]
6 Hb_002228_090 0.1885916688 - - hypothetical protein POPTR_0006s23560g [Populus trichocarpa]
7 Hb_002431_060 0.1955447052 - - -
8 Hb_000184_190 0.2246240459 - - hypothetical protein VITISV_016970 [Vitis vinifera]
9 Hb_002997_130 0.2340407032 - - -
10 Hb_028462_010 0.2340407283 - - PREDICTED: uncharacterized protein LOC101509514 [Cicer arietinum]
11 Hb_123098_010 0.2340407305 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_004899_270 0.2340407481 - - PREDICTED: beta-galactosidase 15-like [Cucumis sativus]
13 Hb_000111_160 0.2340407747 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
14 Hb_018006_020 0.2340408444 - - PREDICTED: uncharacterized protein LOC105641417 [Jatropha curcas]
15 Hb_006053_010 0.2340408667 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
16 Hb_000914_160 0.2340408833 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Glycine max]
17 Hb_007393_010 0.2340409102 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
18 Hb_000413_310 0.2340410722 - - -
19 Hb_000098_160 0.2340410961 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003052_160 0.2340410961 - - -

Gene co-expression network

sample Hb_000445_220 Hb_000445_220 Hb_006922_040 Hb_006922_040 Hb_000445_220--Hb_006922_040 Hb_081207_010 Hb_081207_010 Hb_000445_220--Hb_081207_010 Hb_000501_020 Hb_000501_020 Hb_000445_220--Hb_000501_020 Hb_002259_050 Hb_002259_050 Hb_000445_220--Hb_002259_050 Hb_002228_090 Hb_002228_090 Hb_000445_220--Hb_002228_090 Hb_002431_060 Hb_002431_060 Hb_000445_220--Hb_002431_060 Hb_006922_040--Hb_081207_010 Hb_006922_040--Hb_000501_020 Hb_006922_040--Hb_002259_050 Hb_006922_040--Hb_002228_090 Hb_000184_190 Hb_000184_190 Hb_006922_040--Hb_000184_190 Hb_081207_010--Hb_002259_050 Hb_081207_010--Hb_002228_090 Hb_175450_010 Hb_175450_010 Hb_081207_010--Hb_175450_010 Hb_081207_010--Hb_002431_060 Hb_001865_110 Hb_001865_110 Hb_000501_020--Hb_001865_110 Hb_000501_020--Hb_081207_010 Hb_106029_010 Hb_106029_010 Hb_000501_020--Hb_106029_010 Hb_005222_020 Hb_005222_020 Hb_000501_020--Hb_005222_020 Hb_002259_050--Hb_175450_010 Hb_002259_050--Hb_002431_060 Hb_002259_050--Hb_002228_090 Hb_002228_090--Hb_175450_010 Hb_002228_090--Hb_000184_190 Hb_002918_300 Hb_002918_300 Hb_002431_060--Hb_002918_300 Hb_032660_020 Hb_032660_020 Hb_002431_060--Hb_032660_020 Hb_002431_060--Hb_002228_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.315086 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.49717 1.17932 0 0 0

CAGE analysis