Hb_006922_040

Information

Type -
Description -
Location Contig6922: 69462-71243
Sequence    

Annotation

kegg
ID rcu:RCOM_0926020
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002515575.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID F8WKW1
description 7-deoxyloganetin glucosyltransferase OS=Gardenia jasminoides GN=UGT85A24 PE=1 SV=1
trembl
ID B9RPA6
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_0926020 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 85a5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006922_040 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_000445_220 0.0801119461 - - -
3 Hb_081207_010 0.1139334025 - - hypothetical protein JCGZ_17195 [Jatropha curcas]
4 Hb_000501_020 0.1258783733 - - PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
5 Hb_002259_050 0.1682308742 - - unnamed protein product [Vitis vinifera]
6 Hb_002228_090 0.1917535818 - - hypothetical protein POPTR_0006s23560g [Populus trichocarpa]
7 Hb_000184_190 0.2012809957 - - hypothetical protein VITISV_016970 [Vitis vinifera]
8 Hb_002431_060 0.2060197758 - - -
9 Hb_005222_020 0.230601641 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
10 Hb_032660_020 0.2351562683 - - PREDICTED: F-box protein At5g49610-like [Jatropha curcas]
11 Hb_001865_110 0.2435587892 - - -
12 Hb_000373_300 0.2464567436 - - hypothetical protein F775_20382 [Aegilops tauschii]
13 Hb_006588_010 0.2468366799 - - -
14 Hb_002997_130 0.2479476736 - - -
15 Hb_028462_010 0.2479681303 - - PREDICTED: uncharacterized protein LOC101509514 [Cicer arietinum]
16 Hb_123098_010 0.2479682842 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_004899_270 0.247969454 - - PREDICTED: beta-galactosidase 15-like [Cucumis sativus]
18 Hb_000111_160 0.2479710422 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
19 Hb_018006_020 0.2479745524 - - PREDICTED: uncharacterized protein LOC105641417 [Jatropha curcas]
20 Hb_006053_010 0.2479755396 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_006922_040 Hb_006922_040 Hb_000445_220 Hb_000445_220 Hb_006922_040--Hb_000445_220 Hb_081207_010 Hb_081207_010 Hb_006922_040--Hb_081207_010 Hb_000501_020 Hb_000501_020 Hb_006922_040--Hb_000501_020 Hb_002259_050 Hb_002259_050 Hb_006922_040--Hb_002259_050 Hb_002228_090 Hb_002228_090 Hb_006922_040--Hb_002228_090 Hb_000184_190 Hb_000184_190 Hb_006922_040--Hb_000184_190 Hb_000445_220--Hb_081207_010 Hb_000445_220--Hb_000501_020 Hb_000445_220--Hb_002259_050 Hb_000445_220--Hb_002228_090 Hb_002431_060 Hb_002431_060 Hb_000445_220--Hb_002431_060 Hb_081207_010--Hb_002259_050 Hb_081207_010--Hb_002228_090 Hb_175450_010 Hb_175450_010 Hb_081207_010--Hb_175450_010 Hb_081207_010--Hb_002431_060 Hb_001865_110 Hb_001865_110 Hb_000501_020--Hb_001865_110 Hb_000501_020--Hb_081207_010 Hb_106029_010 Hb_106029_010 Hb_000501_020--Hb_106029_010 Hb_005222_020 Hb_005222_020 Hb_000501_020--Hb_005222_020 Hb_002259_050--Hb_175450_010 Hb_002259_050--Hb_002431_060 Hb_002259_050--Hb_002228_090 Hb_002228_090--Hb_175450_010 Hb_002228_090--Hb_000184_190 Hb_003837_020 Hb_003837_020 Hb_000184_190--Hb_003837_020 Hb_031284_050 Hb_031284_050 Hb_000184_190--Hb_031284_050 Hb_002392_050 Hb_002392_050 Hb_000184_190--Hb_002392_050 Hb_000869_110 Hb_000869_110 Hb_000184_190--Hb_000869_110 Hb_039112_010 Hb_039112_010 Hb_000184_190--Hb_039112_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.187449 0 0 0 0 0.012189
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.854995 0.722469 0 0.00994582 0

CAGE analysis