Hb_002847_020

Information

Type -
Description -
Location Contig2847: 13897-14899
Sequence    

Annotation

kegg
ID rcu:RCOM_0618080
description Nodulin, putative
nr
ID KDP42890.1
description hypothetical protein JCGZ_23832 [Jatropha curcas]
swissprot
ID Q9M2C0
description Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana GN=At3g43660 PE=2 SV=1
trembl
ID A0A067LEF2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23832 PE=4 SV=1
Gene Ontology
ID GO:0005774
description vacuolar iron transporter homolog 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002847_020 0.0 - - hypothetical protein JCGZ_23832 [Jatropha curcas]
2 Hb_001077_020 0.1546673784 - - hypothetical protein JCGZ_23832 [Jatropha curcas]
3 Hb_001449_060 0.2790815994 - - kelch repeat protein, putative [Ricinus communis]
4 Hb_001195_080 0.2822836239 - - PREDICTED: uncharacterized protein LOC105633814 [Jatropha curcas]
5 Hb_010770_010 0.2937569344 - - -
6 Hb_176844_010 0.3172013911 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
7 Hb_000624_020 0.3251970993 transcription factor TF Family: NAC NAC transcription factor 004 [Jatropha curcas]
8 Hb_007805_020 0.325445682 - - -
9 Hb_085892_020 0.3273026818 - - -
10 Hb_123560_030 0.3284357272 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_000463_060 0.3312723258 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
12 Hb_068347_010 0.3333868834 - - -
13 Hb_011909_090 0.3340488474 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105633212 [Jatropha curcas]
14 Hb_004449_230 0.3346559756 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
15 Hb_000472_010 0.3353270735 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_020549_010 0.3373780325 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
17 Hb_000101_180 0.3451222511 - - -
18 Hb_137543_010 0.3452601661 - - -
19 Hb_005730_130 0.345745583 - - PRA1 family protein [Theobroma cacao]
20 Hb_062585_010 0.3516145714 - - hypothetical protein JCGZ_19532 [Jatropha curcas]

Gene co-expression network

sample Hb_002847_020 Hb_002847_020 Hb_001077_020 Hb_001077_020 Hb_002847_020--Hb_001077_020 Hb_001449_060 Hb_001449_060 Hb_002847_020--Hb_001449_060 Hb_001195_080 Hb_001195_080 Hb_002847_020--Hb_001195_080 Hb_010770_010 Hb_010770_010 Hb_002847_020--Hb_010770_010 Hb_176844_010 Hb_176844_010 Hb_002847_020--Hb_176844_010 Hb_000624_020 Hb_000624_020 Hb_002847_020--Hb_000624_020 Hb_001077_020--Hb_001449_060 Hb_085892_020 Hb_085892_020 Hb_001077_020--Hb_085892_020 Hb_001077_020--Hb_001195_080 Hb_123560_030 Hb_123560_030 Hb_001077_020--Hb_123560_030 Hb_000794_040 Hb_000794_040 Hb_001077_020--Hb_000794_040 Hb_003098_010 Hb_003098_010 Hb_001449_060--Hb_003098_010 Hb_005730_130 Hb_005730_130 Hb_001449_060--Hb_005730_130 Hb_076038_010 Hb_076038_010 Hb_001449_060--Hb_076038_010 Hb_000311_030 Hb_000311_030 Hb_001449_060--Hb_000311_030 Hb_001195_080--Hb_000624_020 Hb_001195_080--Hb_176844_010 Hb_001195_080--Hb_001449_060 Hb_007181_040 Hb_007181_040 Hb_001195_080--Hb_007181_040 Hb_010770_010--Hb_176844_010 Hb_012384_050 Hb_012384_050 Hb_010770_010--Hb_012384_050 Hb_087221_010 Hb_087221_010 Hb_010770_010--Hb_087221_010 Hb_073212_010 Hb_073212_010 Hb_010770_010--Hb_073212_010 Hb_007382_040 Hb_007382_040 Hb_010770_010--Hb_007382_040 Hb_000046_410 Hb_000046_410 Hb_010770_010--Hb_000046_410 Hb_000815_140 Hb_000815_140 Hb_176844_010--Hb_000815_140 Hb_176844_010--Hb_000046_410 Hb_013877_020 Hb_013877_020 Hb_176844_010--Hb_013877_020 Hb_176844_010--Hb_012384_050 Hb_176844_010--Hb_087221_010 Hb_121304_020 Hb_121304_020 Hb_000624_020--Hb_121304_020 Hb_000663_030 Hb_000663_030 Hb_000624_020--Hb_000663_030 Hb_002400_370 Hb_002400_370 Hb_000624_020--Hb_002400_370 Hb_004968_010 Hb_004968_010 Hb_000624_020--Hb_004968_010 Hb_010423_010 Hb_010423_010 Hb_000624_020--Hb_010423_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.31012 1.23126 0.0503794 1.0789 0.478265 0.288923
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.384641 0.18144 0 0.0245697 0

CAGE analysis