Hb_000815_140

Information

Type -
Description -
Location Contig815: 167619-169794
Sequence    

Annotation

kegg
ID rcu:RCOM_0837520
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002522465.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9C788
description Cytochrome P450 704B1 OS=Arabidopsis thaliana GN=CYP704B1 PE=2 SV=1
trembl
ID B9S8Z6
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0837520 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 704b1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59359: 170643-172142
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_140 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000028_160 0.1401384378 - - PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2-like [Jatropha curcas]
3 Hb_003064_030 0.1623890748 - - bromodomain-containing protein, putative [Ricinus communis]
4 Hb_010128_070 0.1638795278 - - nucleic acid binding protein, putative [Ricinus communis]
5 Hb_000046_410 0.17436014 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
6 Hb_162286_020 0.1763091162 - - PREDICTED: uncharacterized protein LOC105642702 [Jatropha curcas]
7 Hb_012384_050 0.1808726077 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
8 Hb_000179_200 0.1818696118 - - unnamed protein product [Vitis vinifera]
9 Hb_148121_080 0.1874782461 transcription factor TF Family: C2H2 PREDICTED: protein SHOOT GRAVITROPISM 5 [Populus euphratica]
10 Hb_009620_030 0.1910428051 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP59 [Jatropha curcas]
11 Hb_176844_010 0.1957960304 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
12 Hb_003106_150 0.1989979165 - - PREDICTED: U-box domain-containing protein 38-like [Jatropha curcas]
13 Hb_000365_260 0.2002132018 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004570_020 0.2080403789 - - PREDICTED: protein TIC 100 [Jatropha curcas]
15 Hb_031042_070 0.2087710433 - - conserved hypothetical protein [Ricinus communis]
16 Hb_010128_090 0.2109766902 - - PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas]
17 Hb_010560_060 0.2117644318 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
18 Hb_007982_070 0.2129557712 - - PREDICTED: protein CPR-5 [Jatropha curcas]
19 Hb_002893_150 0.214197216 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
20 Hb_001486_080 0.2147501287 - - PREDICTED: eukaryotic translation initiation factor NCBP [Jatropha curcas]

Gene co-expression network

sample Hb_000815_140 Hb_000815_140 Hb_000028_160 Hb_000028_160 Hb_000815_140--Hb_000028_160 Hb_003064_030 Hb_003064_030 Hb_000815_140--Hb_003064_030 Hb_010128_070 Hb_010128_070 Hb_000815_140--Hb_010128_070 Hb_000046_410 Hb_000046_410 Hb_000815_140--Hb_000046_410 Hb_162286_020 Hb_162286_020 Hb_000815_140--Hb_162286_020 Hb_012384_050 Hb_012384_050 Hb_000815_140--Hb_012384_050 Hb_000028_160--Hb_010128_070 Hb_000742_210 Hb_000742_210 Hb_000028_160--Hb_000742_210 Hb_009620_030 Hb_009620_030 Hb_000028_160--Hb_009620_030 Hb_046931_010 Hb_046931_010 Hb_000028_160--Hb_046931_010 Hb_000028_160--Hb_003064_030 Hb_003064_030--Hb_009620_030 Hb_080147_040 Hb_080147_040 Hb_003064_030--Hb_080147_040 Hb_035318_010 Hb_035318_010 Hb_003064_030--Hb_035318_010 Hb_121729_020 Hb_121729_020 Hb_003064_030--Hb_121729_020 Hb_000787_170 Hb_000787_170 Hb_003064_030--Hb_000787_170 Hb_003064_030--Hb_010128_070 Hb_003106_150 Hb_003106_150 Hb_010128_070--Hb_003106_150 Hb_000281_010 Hb_000281_010 Hb_010128_070--Hb_000281_010 Hb_017075_030 Hb_017075_030 Hb_010128_070--Hb_017075_030 Hb_010128_070--Hb_009620_030 Hb_006615_100 Hb_006615_100 Hb_010128_070--Hb_006615_100 Hb_000116_460 Hb_000116_460 Hb_010128_070--Hb_000116_460 Hb_000046_410--Hb_012384_050 Hb_000046_410--Hb_000028_160 Hb_004361_050 Hb_004361_050 Hb_000046_410--Hb_004361_050 Hb_176844_010 Hb_176844_010 Hb_000046_410--Hb_176844_010 Hb_001138_010 Hb_001138_010 Hb_000046_410--Hb_001138_010 Hb_000365_260 Hb_000365_260 Hb_162286_020--Hb_000365_260 Hb_002276_050 Hb_002276_050 Hb_162286_020--Hb_002276_050 Hb_001474_030 Hb_001474_030 Hb_162286_020--Hb_001474_030 Hb_007305_010 Hb_007305_010 Hb_162286_020--Hb_007305_010 Hb_162286_020--Hb_003064_030 Hb_004678_060 Hb_004678_060 Hb_162286_020--Hb_004678_060 Hb_073212_010 Hb_073212_010 Hb_012384_050--Hb_073212_010 Hb_012384_050--Hb_000365_260 Hb_012384_050--Hb_006615_100 Hb_012384_050--Hb_003064_030 Hb_087221_010 Hb_087221_010 Hb_012384_050--Hb_087221_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.09172 0.952105 0.668363 0.310288 0.738951 1.36268
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.953701 0.181898 0.385425 0.616605 0.667755

CAGE analysis