Hb_080147_040

Information

Type -
Description -
Location Contig80147: 26410-31890
Sequence    

Annotation

kegg
ID rcu:RCOM_1052200
description hypothetical protein
nr
ID KDP33695.1
description hypothetical protein JCGZ_07266 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KN46
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07266 PE=4 SV=1
Gene Ontology
ID GO:0005634
description basic salivary proline-rich protein 3-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58805: 26715-31730 , PASA_asmbl_58807: 30341-30564
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080147_040 0.0 - - hypothetical protein JCGZ_07266 [Jatropha curcas]
2 Hb_000300_360 0.0645797902 - - PREDICTED: exosome component 10 [Jatropha curcas]
3 Hb_009620_030 0.076489822 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP59 [Jatropha curcas]
4 Hb_001953_150 0.0780886064 - - PREDICTED: protein DEK isoform X2 [Jatropha curcas]
5 Hb_006452_160 0.0813543665 - - structural constituent of ribosome, putative [Ricinus communis]
6 Hb_005188_060 0.0828919066 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
7 Hb_140049_020 0.0837520976 - - PREDICTED: cell division cycle protein 73 [Jatropha curcas]
8 Hb_007982_070 0.0838995667 - - PREDICTED: protein CPR-5 [Jatropha curcas]
9 Hb_005883_010 0.0848702051 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000796_190 0.0850914335 - - hypothetical protein F383_31148 [Gossypium arboreum]
11 Hb_011609_170 0.0868681336 - - PREDICTED: T-complex protein 1 subunit zeta 1 [Jatropha curcas]
12 Hb_007943_120 0.0885255513 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X4 [Jatropha curcas]
13 Hb_007229_040 0.0895027397 - - PREDICTED: protein ARABIDILLO 1-like [Jatropha curcas]
14 Hb_028872_120 0.0901368202 - - PREDICTED: cyclin-dependent kinase G-2 [Jatropha curcas]
15 Hb_000753_100 0.0901399521 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105640677 isoform X1 [Jatropha curcas]
16 Hb_000270_460 0.0901478776 - - PREDICTED: anaphase-promoting complex subunit 8 [Jatropha curcas]
17 Hb_003633_070 0.0904555523 - - PREDICTED: uncharacterized protein LOC105647493 [Jatropha curcas]
18 Hb_003529_130 0.0906784156 - - PREDICTED: ribosome biogenesis protein BOP1 homolog isoform X1 [Jatropha curcas]
19 Hb_003680_230 0.0908090947 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105642342 [Jatropha curcas]
20 Hb_002045_150 0.0922566714 - - histone acetyltransferase gcn5, putative [Ricinus communis]

Gene co-expression network

sample Hb_080147_040 Hb_080147_040 Hb_000300_360 Hb_000300_360 Hb_080147_040--Hb_000300_360 Hb_009620_030 Hb_009620_030 Hb_080147_040--Hb_009620_030 Hb_001953_150 Hb_001953_150 Hb_080147_040--Hb_001953_150 Hb_006452_160 Hb_006452_160 Hb_080147_040--Hb_006452_160 Hb_005188_060 Hb_005188_060 Hb_080147_040--Hb_005188_060 Hb_140049_020 Hb_140049_020 Hb_080147_040--Hb_140049_020 Hb_007982_070 Hb_007982_070 Hb_000300_360--Hb_007982_070 Hb_001633_040 Hb_001633_040 Hb_000300_360--Hb_001633_040 Hb_000796_190 Hb_000796_190 Hb_000300_360--Hb_000796_190 Hb_000300_360--Hb_140049_020 Hb_007558_120 Hb_007558_120 Hb_000300_360--Hb_007558_120 Hb_001900_120 Hb_001900_120 Hb_009620_030--Hb_001900_120 Hb_017895_020 Hb_017895_020 Hb_009620_030--Hb_017895_020 Hb_147737_010 Hb_147737_010 Hb_009620_030--Hb_147737_010 Hb_002675_040 Hb_002675_040 Hb_009620_030--Hb_002675_040 Hb_006588_050 Hb_006588_050 Hb_009620_030--Hb_006588_050 Hb_000922_140 Hb_000922_140 Hb_001953_150--Hb_000922_140 Hb_005332_020 Hb_005332_020 Hb_001953_150--Hb_005332_020 Hb_001799_050 Hb_001799_050 Hb_001953_150--Hb_001799_050 Hb_001143_250 Hb_001143_250 Hb_001953_150--Hb_001143_250 Hb_000270_460 Hb_000270_460 Hb_001953_150--Hb_000270_460 Hb_002739_130 Hb_002739_130 Hb_006452_160--Hb_002739_130 Hb_000563_330 Hb_000563_330 Hb_006452_160--Hb_000563_330 Hb_002045_150 Hb_002045_150 Hb_006452_160--Hb_002045_150 Hb_006452_160--Hb_005188_060 Hb_000140_330 Hb_000140_330 Hb_006452_160--Hb_000140_330 Hb_016734_090 Hb_016734_090 Hb_006452_160--Hb_016734_090 Hb_007943_120 Hb_007943_120 Hb_005188_060--Hb_007943_120 Hb_005883_010 Hb_005883_010 Hb_005188_060--Hb_005883_010 Hb_003680_230 Hb_003680_230 Hb_005188_060--Hb_003680_230 Hb_005188_060--Hb_000140_330 Hb_007229_040 Hb_007229_040 Hb_005188_060--Hb_007229_040 Hb_004635_050 Hb_004635_050 Hb_005188_060--Hb_004635_050 Hb_000313_340 Hb_000313_340 Hb_140049_020--Hb_000313_340 Hb_019153_020 Hb_019153_020 Hb_140049_020--Hb_019153_020 Hb_005539_190 Hb_005539_190 Hb_140049_020--Hb_005539_190 Hb_000329_130 Hb_000329_130 Hb_140049_020--Hb_000329_130 Hb_140049_020--Hb_007229_040 Hb_000363_130 Hb_000363_130 Hb_140049_020--Hb_000363_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
65.4899 49.0147 36.4038 18.655 44.5367 54.5995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.724 15.6458 16.0571 24.604 17.823

CAGE analysis