Hb_010423_010

Information

Type -
Description -
Location Contig10423: 19374-20665
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010423_010 0.0 - - -
2 Hb_022593_030 0.1486041294 - - polyprotein [Citrus endogenous pararetrovirus]
3 Hb_001369_560 0.1616602855 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
4 Hb_096473_010 0.1620217887 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
5 Hb_000108_040 0.2434355993 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Gossypium raimondii]
6 Hb_003442_010 0.2525577723 - - PREDICTED: structural maintenance of chromosomes protein 4-like isoform X2 [Citrus sinensis]
7 Hb_001004_050 0.2599908743 - - PREDICTED: uncharacterized protein LOC103335231 [Prunus mume]
8 Hb_009913_010 0.2647350371 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
9 Hb_000638_150 0.2651462941 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
10 Hb_000197_170 0.2683295491 - - ATP binding protein, putative [Ricinus communis]
11 Hb_000661_280 0.2686922186 - - PREDICTED: protein TRAUCO [Jatropha curcas]
12 Hb_005147_050 0.2884349953 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
13 Hb_001489_140 0.2893277927 transcription factor TF Family: AP2 hypothetical protein JCGZ_21694 [Jatropha curcas]
14 Hb_004667_040 0.2912400857 - - ATP binding protein, putative [Ricinus communis]
15 Hb_001122_010 0.2932188825 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
16 Hb_002641_050 0.3038124328 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 48 [Jatropha curcas]
17 Hb_000624_020 0.3056478745 transcription factor TF Family: NAC NAC transcription factor 004 [Jatropha curcas]
18 Hb_002447_160 0.3082730747 - - -
19 Hb_000077_440 0.3094265799 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
20 Hb_144547_010 0.3099042181 - - hypothetical protein JCGZ_26658 [Jatropha curcas]

Gene co-expression network

sample Hb_010423_010 Hb_010423_010 Hb_022593_030 Hb_022593_030 Hb_010423_010--Hb_022593_030 Hb_001369_560 Hb_001369_560 Hb_010423_010--Hb_001369_560 Hb_096473_010 Hb_096473_010 Hb_010423_010--Hb_096473_010 Hb_000108_040 Hb_000108_040 Hb_010423_010--Hb_000108_040 Hb_003442_010 Hb_003442_010 Hb_010423_010--Hb_003442_010 Hb_001004_050 Hb_001004_050 Hb_010423_010--Hb_001004_050 Hb_022593_030--Hb_001369_560 Hb_022593_030--Hb_003442_010 Hb_009913_010 Hb_009913_010 Hb_022593_030--Hb_009913_010 Hb_007441_060 Hb_007441_060 Hb_022593_030--Hb_007441_060 Hb_005147_050 Hb_005147_050 Hb_022593_030--Hb_005147_050 Hb_032050_070 Hb_032050_070 Hb_001369_560--Hb_032050_070 Hb_002035_030 Hb_002035_030 Hb_001369_560--Hb_002035_030 Hb_001369_560--Hb_003442_010 Hb_000661_280 Hb_000661_280 Hb_001369_560--Hb_000661_280 Hb_096473_010--Hb_000108_040 Hb_000197_170 Hb_000197_170 Hb_096473_010--Hb_000197_170 Hb_096473_010--Hb_001004_050 Hb_096473_010--Hb_022593_030 Hb_096473_010--Hb_001369_560 Hb_002044_110 Hb_002044_110 Hb_000108_040--Hb_002044_110 Hb_001628_030 Hb_001628_030 Hb_000108_040--Hb_001628_030 Hb_004544_010 Hb_004544_010 Hb_000108_040--Hb_004544_010 Hb_004631_100 Hb_004631_100 Hb_000108_040--Hb_004631_100 Hb_004785_160 Hb_004785_160 Hb_000108_040--Hb_004785_160 Hb_008725_030 Hb_008725_030 Hb_000108_040--Hb_008725_030 Hb_000189_490 Hb_000189_490 Hb_003442_010--Hb_000189_490 Hb_001481_020 Hb_001481_020 Hb_003442_010--Hb_001481_020 Hb_183820_010 Hb_183820_010 Hb_003442_010--Hb_183820_010 Hb_001103_040 Hb_001103_040 Hb_003442_010--Hb_001103_040 Hb_000365_290 Hb_000365_290 Hb_003442_010--Hb_000365_290 Hb_083493_020 Hb_083493_020 Hb_003442_010--Hb_083493_020 Hb_009979_010 Hb_009979_010 Hb_001004_050--Hb_009979_010 Hb_002447_160 Hb_002447_160 Hb_001004_050--Hb_002447_160 Hb_183192_010 Hb_183192_010 Hb_001004_050--Hb_183192_010 Hb_001141_200 Hb_001141_200 Hb_001004_050--Hb_001141_200 Hb_004021_090 Hb_004021_090 Hb_001004_050--Hb_004021_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0382307 0.0389279 0.0307887 0.0352003 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0283778 0

CAGE analysis