Hb_000197_170

Information

Type -
Description -
Location Contig197: 189061-193136
Sequence    

Annotation

kegg
ID rcu:RCOM_1447940
description ATP binding protein, putative
nr
ID XP_002512936.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9P6Q3
description Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
trembl
ID B9RH77
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_1447940 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000197_170 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_000413_150 0.1731723048 - - PREDICTED: uncharacterized protein LOC103709996 [Phoenix dactylifera]
3 Hb_003032_060 0.2049799635 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
4 Hb_005276_030 0.2215040258 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
5 Hb_047560_010 0.2274522207 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
6 Hb_096473_010 0.2360687149 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
7 Hb_093385_010 0.2378944398 - - PREDICTED: probable mannitol dehydrogenase [Pyrus x bretschneideri]
8 Hb_003712_010 0.2407840114 - - protein binding protein, putative [Ricinus communis]
9 Hb_000406_010 0.2525014258 - - PREDICTED: uncharacterized protein LOC105647846 [Jatropha curcas]
10 Hb_002325_030 0.2580826804 - - PREDICTED: glucan endo-1,3-beta-glucosidase 2 [Jatropha curcas]
11 Hb_144547_010 0.2625719564 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
12 Hb_008250_020 0.2639371296 - - PREDICTED: U-box domain-containing protein 15-like isoform X1 [Jatropha curcas]
13 Hb_004495_010 0.2653971186 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
14 Hb_010423_010 0.2683295491 - - -
15 Hb_000007_380 0.2687165332 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
16 Hb_000077_440 0.2697152559 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
17 Hb_002343_030 0.2704499142 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005601_030 0.2728413495 - - organic anion transporter, putative [Ricinus communis]
19 Hb_014919_020 0.2740315654 - - -
20 Hb_000108_040 0.2753852154 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Gossypium raimondii]

Gene co-expression network

sample Hb_000197_170 Hb_000197_170 Hb_000413_150 Hb_000413_150 Hb_000197_170--Hb_000413_150 Hb_003032_060 Hb_003032_060 Hb_000197_170--Hb_003032_060 Hb_005276_030 Hb_005276_030 Hb_000197_170--Hb_005276_030 Hb_047560_010 Hb_047560_010 Hb_000197_170--Hb_047560_010 Hb_096473_010 Hb_096473_010 Hb_000197_170--Hb_096473_010 Hb_093385_010 Hb_093385_010 Hb_000197_170--Hb_093385_010 Hb_014919_020 Hb_014919_020 Hb_000413_150--Hb_014919_020 Hb_000406_010 Hb_000406_010 Hb_000413_150--Hb_000406_010 Hb_000413_150--Hb_093385_010 Hb_188411_010 Hb_188411_010 Hb_000413_150--Hb_188411_010 Hb_115116_010 Hb_115116_010 Hb_000413_150--Hb_115116_010 Hb_003712_010 Hb_003712_010 Hb_003032_060--Hb_003712_010 Hb_000193_060 Hb_000193_060 Hb_003032_060--Hb_000193_060 Hb_006153_010 Hb_006153_010 Hb_003032_060--Hb_006153_010 Hb_076771_010 Hb_076771_010 Hb_003032_060--Hb_076771_010 Hb_008250_020 Hb_008250_020 Hb_003032_060--Hb_008250_020 Hb_000878_120 Hb_000878_120 Hb_003032_060--Hb_000878_120 Hb_006775_070 Hb_006775_070 Hb_005276_030--Hb_006775_070 Hb_005276_030--Hb_008250_020 Hb_173029_030 Hb_173029_030 Hb_005276_030--Hb_173029_030 Hb_000069_300 Hb_000069_300 Hb_005276_030--Hb_000069_300 Hb_001536_020 Hb_001536_020 Hb_005276_030--Hb_001536_020 Hb_144547_010 Hb_144547_010 Hb_047560_010--Hb_144547_010 Hb_005601_030 Hb_005601_030 Hb_047560_010--Hb_005601_030 Hb_143933_010 Hb_143933_010 Hb_047560_010--Hb_143933_010 Hb_130739_010 Hb_130739_010 Hb_047560_010--Hb_130739_010 Hb_001391_050 Hb_001391_050 Hb_047560_010--Hb_001391_050 Hb_010423_010 Hb_010423_010 Hb_096473_010--Hb_010423_010 Hb_000108_040 Hb_000108_040 Hb_096473_010--Hb_000108_040 Hb_001004_050 Hb_001004_050 Hb_096473_010--Hb_001004_050 Hb_022593_030 Hb_022593_030 Hb_096473_010--Hb_022593_030 Hb_001369_560 Hb_001369_560 Hb_096473_010--Hb_001369_560 Hb_093385_010--Hb_000406_010 Hb_002343_030 Hb_002343_030 Hb_093385_010--Hb_002343_030 Hb_000988_010 Hb_000988_010 Hb_093385_010--Hb_000988_010 Hb_000039_080 Hb_000039_080 Hb_093385_010--Hb_000039_080 Hb_000105_110 Hb_000105_110 Hb_093385_010--Hb_000105_110 Hb_187739_010 Hb_187739_010 Hb_093385_010--Hb_187739_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0651924 0.0601686 0.133983 0.120871 0.0145564 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0208091 0

CAGE analysis