Hb_002343_030

Information

Type -
Description -
Location Contig2343: 55674-56084
Sequence    

Annotation

kegg
ID rcu:RCOM_1681200
description hypothetical protein
nr
ID XP_002509629.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RBU5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1681200 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002343_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000105_110 0.1477162617 - - hypothetical protein, partial [Fervidibacteria bacterium SCGC AAA471-D06]
3 Hb_093385_010 0.1887974262 - - PREDICTED: probable mannitol dehydrogenase [Pyrus x bretschneideri]
4 Hb_000808_120 0.2137529257 - - -
5 Hb_005601_030 0.2338424414 - - organic anion transporter, putative [Ricinus communis]
6 Hb_053073_010 0.2353635324 - - -
7 Hb_000406_010 0.2401917063 - - PREDICTED: uncharacterized protein LOC105647846 [Jatropha curcas]
8 Hb_047560_010 0.240825466 - - PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
9 Hb_002570_010 0.2535510225 - - hypothetical protein JCGZ_25329 [Jatropha curcas]
10 Hb_000977_200 0.2554543675 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Jatropha curcas]
11 Hb_000413_150 0.2609203723 - - PREDICTED: uncharacterized protein LOC103709996 [Phoenix dactylifera]
12 Hb_000302_070 0.2613856318 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
13 Hb_006286_010 0.2616163901 - - hypothetical protein PRUPE_ppa017148mg [Prunus persica]
14 Hb_014705_010 0.2629574092 - - hypothetical protein JCGZ_21106 [Jatropha curcas]
15 Hb_000107_260 0.2635684163 - - -
16 Hb_001762_050 0.2669307522 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
17 Hb_001391_050 0.2683683349 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
18 Hb_071781_010 0.2703425843 - - hypothetical protein POPTR_0010s13190g [Populus trichocarpa]
19 Hb_000197_170 0.2704499142 - - ATP binding protein, putative [Ricinus communis]
20 Hb_009372_050 0.2778292708 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_002343_030 Hb_002343_030 Hb_000105_110 Hb_000105_110 Hb_002343_030--Hb_000105_110 Hb_093385_010 Hb_093385_010 Hb_002343_030--Hb_093385_010 Hb_000808_120 Hb_000808_120 Hb_002343_030--Hb_000808_120 Hb_005601_030 Hb_005601_030 Hb_002343_030--Hb_005601_030 Hb_053073_010 Hb_053073_010 Hb_002343_030--Hb_053073_010 Hb_000406_010 Hb_000406_010 Hb_002343_030--Hb_000406_010 Hb_000723_070 Hb_000723_070 Hb_000105_110--Hb_000723_070 Hb_000302_070 Hb_000302_070 Hb_000105_110--Hb_000302_070 Hb_000105_110--Hb_093385_010 Hb_000105_110--Hb_005601_030 Hb_007617_040 Hb_007617_040 Hb_000105_110--Hb_007617_040 Hb_093385_010--Hb_000406_010 Hb_000988_010 Hb_000988_010 Hb_093385_010--Hb_000988_010 Hb_000039_080 Hb_000039_080 Hb_093385_010--Hb_000039_080 Hb_187739_010 Hb_187739_010 Hb_093385_010--Hb_187739_010 Hb_071781_010 Hb_071781_010 Hb_000808_120--Hb_071781_010 Hb_005332_130 Hb_005332_130 Hb_000808_120--Hb_005332_130 Hb_004112_060 Hb_004112_060 Hb_000808_120--Hb_004112_060 Hb_000808_120--Hb_053073_010 Hb_013834_010 Hb_013834_010 Hb_000808_120--Hb_013834_010 Hb_183671_010 Hb_183671_010 Hb_005601_030--Hb_183671_010 Hb_115832_010 Hb_115832_010 Hb_005601_030--Hb_115832_010 Hb_001391_050 Hb_001391_050 Hb_005601_030--Hb_001391_050 Hb_019181_020 Hb_019181_020 Hb_005601_030--Hb_019181_020 Hb_047560_010 Hb_047560_010 Hb_005601_030--Hb_047560_010 Hb_001208_020 Hb_001208_020 Hb_053073_010--Hb_001208_020 Hb_002965_180 Hb_002965_180 Hb_053073_010--Hb_002965_180 Hb_001459_040 Hb_001459_040 Hb_053073_010--Hb_001459_040 Hb_163400_010 Hb_163400_010 Hb_053073_010--Hb_163400_010 Hb_149194_010 Hb_149194_010 Hb_053073_010--Hb_149194_010 Hb_014705_010 Hb_014705_010 Hb_053073_010--Hb_014705_010 Hb_188411_010 Hb_188411_010 Hb_000406_010--Hb_188411_010 Hb_133605_010 Hb_133605_010 Hb_000406_010--Hb_133605_010 Hb_000413_150 Hb_000413_150 Hb_000406_010--Hb_000413_150 Hb_000197_170 Hb_000197_170 Hb_000406_010--Hb_000197_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.159937 0.0847412 0.462115 0.540018 0.0809152 0.0726931
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis