Hb_149194_010

Information

Type -
Description -
Location Contig149194: 1649-2560
Sequence    

Annotation

kegg
ID pop:POPTR_0006s06320g
description hypothetical protein
nr
ID KDP30239.1
description hypothetical protein JCGZ_17021 [Jatropha curcas]
swissprot
ID Q93ZH9
description Heptahelical transmembrane protein 1 OS=Arabidopsis thaliana GN=HHP1 PE=1 SV=1
trembl
ID A0A067KEJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17021 PE=4 SV=1
Gene Ontology
ID GO:0016021
description heptahelical transmembrane protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_149194_010 0.0 - - hypothetical protein JCGZ_17021 [Jatropha curcas]
2 Hb_000025_800 0.0770484708 - - hypothetical protein VITISV_020143 [Vitis vinifera]
3 Hb_119583_030 0.0832941511 - - unnamed protein product [Vitis vinifera]
4 Hb_001518_050 0.0905240578 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_185437_010 0.0911089596 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
6 Hb_010252_010 0.0994659343 - - -
7 Hb_000908_030 0.1034394154 - - small heat-shock protein, putative [Ricinus communis]
8 Hb_057721_010 0.1050256423 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
9 Hb_002163_070 0.1067896672 - - hypothetical protein JCGZ_13728 [Jatropha curcas]
10 Hb_177179_020 0.1074774763 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000483_120 0.1079133471 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
12 Hb_179367_020 0.1081407774 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
13 Hb_039440_010 0.1109581432 - - conserved hypothetical protein [Ricinus communis]
14 Hb_009083_020 0.1206990584 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
15 Hb_160950_010 0.1220109277 - - PREDICTED: uncharacterized protein LOC105761043 [Gossypium raimondii]
16 Hb_137862_020 0.1294492009 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
17 Hb_003878_130 0.1327065273 - - -
18 Hb_003489_010 0.1366210986 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
19 Hb_001976_070 0.137339903 - - PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
20 Hb_000170_260 0.1493693384 - - amino acid transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_149194_010 Hb_149194_010 Hb_000025_800 Hb_000025_800 Hb_149194_010--Hb_000025_800 Hb_119583_030 Hb_119583_030 Hb_149194_010--Hb_119583_030 Hb_001518_050 Hb_001518_050 Hb_149194_010--Hb_001518_050 Hb_185437_010 Hb_185437_010 Hb_149194_010--Hb_185437_010 Hb_010252_010 Hb_010252_010 Hb_149194_010--Hb_010252_010 Hb_000908_030 Hb_000908_030 Hb_149194_010--Hb_000908_030 Hb_000025_800--Hb_119583_030 Hb_000025_800--Hb_185437_010 Hb_000025_800--Hb_001518_050 Hb_000025_800--Hb_010252_010 Hb_002163_070 Hb_002163_070 Hb_000025_800--Hb_002163_070 Hb_057721_010 Hb_057721_010 Hb_000025_800--Hb_057721_010 Hb_119583_030--Hb_057721_010 Hb_119583_030--Hb_010252_010 Hb_119583_030--Hb_002163_070 Hb_119583_030--Hb_185437_010 Hb_000483_120 Hb_000483_120 Hb_119583_030--Hb_000483_120 Hb_001518_050--Hb_185437_010 Hb_039440_010 Hb_039440_010 Hb_001518_050--Hb_039440_010 Hb_001518_050--Hb_119583_030 Hb_001518_050--Hb_010252_010 Hb_160950_010 Hb_160950_010 Hb_001518_050--Hb_160950_010 Hb_185437_010--Hb_039440_010 Hb_185437_010--Hb_010252_010 Hb_185437_010--Hb_160950_010 Hb_010252_010--Hb_002163_070 Hb_009083_020 Hb_009083_020 Hb_010252_010--Hb_009083_020 Hb_010252_010--Hb_160950_010 Hb_179367_020 Hb_179367_020 Hb_000908_030--Hb_179367_020 Hb_001976_070 Hb_001976_070 Hb_000908_030--Hb_001976_070 Hb_003878_130 Hb_003878_130 Hb_000908_030--Hb_003878_130 Hb_177179_020 Hb_177179_020 Hb_000908_030--Hb_177179_020 Hb_000908_030--Hb_000025_800 Hb_132880_020 Hb_132880_020 Hb_000908_030--Hb_132880_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.509559 1.32784 2.1297 0 0.0468756
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis