Hb_001976_070

Information

Type -
Description -
Location Contig1976: 79463-79930
Sequence    

Annotation

kegg
ID cam:101497268
description uncharacterized LOC101497268
nr
ID XP_004514013.1
description PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001976_070 0.0 - - PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
2 Hb_179367_020 0.0411681541 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
3 Hb_000908_030 0.0449613819 - - small heat-shock protein, putative [Ricinus communis]
4 Hb_132880_020 0.061829214 - - hypothetical protein VITISV_026364 [Vitis vinifera]
5 Hb_157881_010 0.0643903404 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_003878_130 0.0809823194 - - -
7 Hb_001152_040 0.0916771631 - - peripheral-type benzodiazepine receptor, putative [Ricinus communis]
8 Hb_004342_040 0.0955987016 - - PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like [Jatropha curcas]
9 Hb_000009_100 0.0971220312 transcription factor TF Family: HB hypothetical protein JCGZ_12260 [Jatropha curcas]
10 Hb_177179_020 0.1059871169 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001006_080 0.1137830386 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
12 Hb_000483_120 0.1208501376 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
13 Hb_000025_800 0.122757914 - - hypothetical protein VITISV_020143 [Vitis vinifera]
14 Hb_000696_120 0.1237939802 - - PREDICTED: protein FD [Populus euphratica]
15 Hb_089040_010 0.124425944 - - Glycosyl hydrolase family protein isoform 1 [Theobroma cacao]
16 Hb_001518_050 0.1289347087 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_005057_020 0.1315680691 - - PREDICTED: uncharacterized protein LOC105631610 [Jatropha curcas]
18 Hb_061335_010 0.1321349026 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
19 Hb_001488_120 0.1356642876 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
20 Hb_149194_010 0.137339903 - - hypothetical protein JCGZ_17021 [Jatropha curcas]

Gene co-expression network

sample Hb_001976_070 Hb_001976_070 Hb_179367_020 Hb_179367_020 Hb_001976_070--Hb_179367_020 Hb_000908_030 Hb_000908_030 Hb_001976_070--Hb_000908_030 Hb_132880_020 Hb_132880_020 Hb_001976_070--Hb_132880_020 Hb_157881_010 Hb_157881_010 Hb_001976_070--Hb_157881_010 Hb_003878_130 Hb_003878_130 Hb_001976_070--Hb_003878_130 Hb_001152_040 Hb_001152_040 Hb_001976_070--Hb_001152_040 Hb_179367_020--Hb_000908_030 Hb_177179_020 Hb_177179_020 Hb_179367_020--Hb_177179_020 Hb_179367_020--Hb_132880_020 Hb_000025_800 Hb_000025_800 Hb_179367_020--Hb_000025_800 Hb_000483_120 Hb_000483_120 Hb_179367_020--Hb_000483_120 Hb_000908_030--Hb_003878_130 Hb_000908_030--Hb_177179_020 Hb_000908_030--Hb_000025_800 Hb_000908_030--Hb_132880_020 Hb_000009_100 Hb_000009_100 Hb_132880_020--Hb_000009_100 Hb_132880_020--Hb_001152_040 Hb_132880_020--Hb_157881_010 Hb_004342_040 Hb_004342_040 Hb_157881_010--Hb_004342_040 Hb_061335_010 Hb_061335_010 Hb_157881_010--Hb_061335_010 Hb_005057_020 Hb_005057_020 Hb_157881_010--Hb_005057_020 Hb_000696_120 Hb_000696_120 Hb_157881_010--Hb_000696_120 Hb_001006_080 Hb_001006_080 Hb_003878_130--Hb_001006_080 Hb_003878_130--Hb_000696_120 Hb_003878_130--Hb_179367_020 Hb_001518_050 Hb_001518_050 Hb_003878_130--Hb_001518_050 Hb_001152_040--Hb_000009_100 Hb_064194_010 Hb_064194_010 Hb_001152_040--Hb_064194_010 Hb_001152_040--Hb_177179_020 Hb_001152_040--Hb_179367_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0550479 0.260666 0.572473 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis