Hb_000009_100

Information

Type transcription factor
Description TF Family: HB
Location Contig9: 102682-104282
Sequence    

Annotation

kegg
ID rcu:RCOM_0553230
description homeobox protein, putative
nr
ID KDP31799.1
description hypothetical protein JCGZ_12260 [Jatropha curcas]
swissprot
ID O23208
description Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=3
trembl
ID A0A067KIZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12260 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein athb-40

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61833: 102806-104306
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_100 0.0 transcription factor TF Family: HB hypothetical protein JCGZ_12260 [Jatropha curcas]
2 Hb_001152_040 0.032522176 - - peripheral-type benzodiazepine receptor, putative [Ricinus communis]
3 Hb_132880_020 0.0359551788 - - hypothetical protein VITISV_026364 [Vitis vinifera]
4 Hb_013394_110 0.0829341867 - - zinc finger protein, putative [Ricinus communis]
5 Hb_064194_010 0.0845456968 - - PREDICTED: endoglucanase 6 [Jatropha curcas]
6 Hb_001976_070 0.0971220312 - - PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
7 Hb_001488_120 0.1033272144 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
8 Hb_179367_020 0.1063922141 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
9 Hb_011515_020 0.1136455419 - - PREDICTED: dehydration-responsive element-binding protein 1F-like [Jatropha curcas]
10 Hb_001021_190 0.1136650138 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
11 Hb_003784_030 0.1137532495 - - conserved hypothetical protein [Ricinus communis]
12 Hb_077165_010 0.1138738256 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000005_150 0.1139316436 - - PREDICTED: cation/H(+) antiporter 10-like [Jatropha curcas]
14 Hb_002383_010 0.1140081789 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
15 Hb_168451_010 0.114374123 - - PREDICTED: acid phosphatase 1-like [Populus euphratica]
16 Hb_053224_010 0.1144108482 - - PREDICTED: protein argonaute 16 isoform X2 [Jatropha curcas]
17 Hb_012758_020 0.1144312411 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
18 Hb_005858_010 0.1146709428 transcription factor TF Family: HB hypothetical protein JCGZ_12260 [Jatropha curcas]
19 Hb_032907_020 0.1151266267 - - calmodulin binding protein, putative [Ricinus communis]
20 Hb_000295_140 0.1152612282 - - PREDICTED: uncharacterized protein LOC105628741 [Jatropha curcas]

Gene co-expression network

sample Hb_000009_100 Hb_000009_100 Hb_001152_040 Hb_001152_040 Hb_000009_100--Hb_001152_040 Hb_132880_020 Hb_132880_020 Hb_000009_100--Hb_132880_020 Hb_013394_110 Hb_013394_110 Hb_000009_100--Hb_013394_110 Hb_064194_010 Hb_064194_010 Hb_000009_100--Hb_064194_010 Hb_001976_070 Hb_001976_070 Hb_000009_100--Hb_001976_070 Hb_001488_120 Hb_001488_120 Hb_000009_100--Hb_001488_120 Hb_001152_040--Hb_132880_020 Hb_001152_040--Hb_064194_010 Hb_177179_020 Hb_177179_020 Hb_001152_040--Hb_177179_020 Hb_179367_020 Hb_179367_020 Hb_001152_040--Hb_179367_020 Hb_001152_040--Hb_001976_070 Hb_132880_020--Hb_001976_070 Hb_132880_020--Hb_179367_020 Hb_000908_030 Hb_000908_030 Hb_132880_020--Hb_000908_030 Hb_157881_010 Hb_157881_010 Hb_132880_020--Hb_157881_010 Hb_005858_010 Hb_005858_010 Hb_013394_110--Hb_005858_010 Hb_012758_020 Hb_012758_020 Hb_013394_110--Hb_012758_020 Hb_000245_010 Hb_000245_010 Hb_013394_110--Hb_000245_010 Hb_002383_010 Hb_002383_010 Hb_013394_110--Hb_002383_010 Hb_000005_150 Hb_000005_150 Hb_013394_110--Hb_000005_150 Hb_001414_070 Hb_001414_070 Hb_013394_110--Hb_001414_070 Hb_064194_010--Hb_132880_020 Hb_000700_020 Hb_000700_020 Hb_064194_010--Hb_000700_020 Hb_064194_010--Hb_177179_020 Hb_109304_010 Hb_109304_010 Hb_064194_010--Hb_109304_010 Hb_001976_070--Hb_179367_020 Hb_001976_070--Hb_000908_030 Hb_001976_070--Hb_157881_010 Hb_003878_130 Hb_003878_130 Hb_001976_070--Hb_003878_130 Hb_001488_120--Hb_132880_020 Hb_001488_120--Hb_001152_040 Hb_001488_120--Hb_013394_110 Hb_001488_120--Hb_001976_070 Hb_001488_120--Hb_157881_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0408115 0.59246 0.961497 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis