Hb_005858_010

Information

Type transcription factor
Description TF Family: HB
Location Contig5858: 38020-39663
Sequence    

Annotation

kegg
ID rcu:RCOM_0553230
description homeobox protein, putative
nr
ID KDP31799.1
description hypothetical protein JCGZ_12260 [Jatropha curcas]
swissprot
ID Q9ZU70
description Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1
trembl
ID A0A067KIZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12260 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein athb-40

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005858_010 0.0 transcription factor TF Family: HB hypothetical protein JCGZ_12260 [Jatropha curcas]
2 Hb_012758_020 0.0019257637 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
3 Hb_002383_010 0.0062501831 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
4 Hb_000245_010 0.0065599041 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Populus euphratica]
5 Hb_000005_150 0.0072720572 - - PREDICTED: cation/H(+) antiporter 10-like [Jatropha curcas]
6 Hb_077165_010 0.0081380961 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001414_070 0.011936934 - - Zinc finger protein GIS2 [Medicago truncatula]
8 Hb_007138_020 0.0121143011 - - hypothetical protein POPTR_0019s09630g [Populus trichocarpa]
9 Hb_014776_010 0.0130635473 - - PREDICTED: receptor-like protein kinase 5 [Jatropha curcas]
10 Hb_088508_010 0.0136002834 - - cytochrome P450, putative [Ricinus communis]
11 Hb_014223_030 0.0143695334 - - PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220 [Jatropha curcas]
12 Hb_002471_030 0.0147965957 - - PREDICTED: cyclin-J18 [Jatropha curcas]
13 Hb_011515_020 0.0149124562 - - PREDICTED: dehydration-responsive element-binding protein 1F-like [Jatropha curcas]
14 Hb_001021_190 0.0175834138 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
15 Hb_000018_080 0.0178054728 - - hypothetical protein JCGZ_07748 [Jatropha curcas]
16 Hb_007292_040 0.0199230559 - - Plastid developmental protein DAG [Theobroma cacao]
17 Hb_000762_100 0.0203526959 - - PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
18 Hb_003784_030 0.0204141127 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001140_120 0.0206555128 - - PREDICTED: uncharacterized protein LOC105648582 [Jatropha curcas]
20 Hb_001098_060 0.0215154855 - - -

Gene co-expression network

sample Hb_005858_010 Hb_005858_010 Hb_012758_020 Hb_012758_020 Hb_005858_010--Hb_012758_020 Hb_002383_010 Hb_002383_010 Hb_005858_010--Hb_002383_010 Hb_000245_010 Hb_000245_010 Hb_005858_010--Hb_000245_010 Hb_000005_150 Hb_000005_150 Hb_005858_010--Hb_000005_150 Hb_077165_010 Hb_077165_010 Hb_005858_010--Hb_077165_010 Hb_001414_070 Hb_001414_070 Hb_005858_010--Hb_001414_070 Hb_012758_020--Hb_002383_010 Hb_012758_020--Hb_000005_150 Hb_012758_020--Hb_077165_010 Hb_012758_020--Hb_000245_010 Hb_011515_020 Hb_011515_020 Hb_012758_020--Hb_011515_020 Hb_002383_010--Hb_000005_150 Hb_002383_010--Hb_077165_010 Hb_002383_010--Hb_011515_020 Hb_001021_190 Hb_001021_190 Hb_002383_010--Hb_001021_190 Hb_000245_010--Hb_001414_070 Hb_007138_020 Hb_007138_020 Hb_000245_010--Hb_007138_020 Hb_014776_010 Hb_014776_010 Hb_000245_010--Hb_014776_010 Hb_088508_010 Hb_088508_010 Hb_000245_010--Hb_088508_010 Hb_014223_030 Hb_014223_030 Hb_000245_010--Hb_014223_030 Hb_000005_150--Hb_077165_010 Hb_000005_150--Hb_011515_020 Hb_000005_150--Hb_001021_190 Hb_077165_010--Hb_011515_020 Hb_077165_010--Hb_001021_190 Hb_001414_070--Hb_007138_020 Hb_001414_070--Hb_014776_010 Hb_001414_070--Hb_088508_010 Hb_001414_070--Hb_014223_030 Hb_002471_030 Hb_002471_030 Hb_001414_070--Hb_002471_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.157615 0.27573 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis