Hb_163400_010

Information

Type -
Description -
Location Contig163400: 68-968
Sequence    

Annotation

kegg
ID mdm:103443619
description uncharacterized LOC103443619
nr
ID XP_012069226.1
description PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
swissprot
ID P61872
description Lipase OS=Rhizopus oryzae PE=1 SV=1
trembl
ID A0A067KWS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24611 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_163400_010 0.0 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
2 Hb_053073_010 0.1993479133 - - -
3 Hb_186304_010 0.2088193678 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
4 Hb_044653_010 0.244621244 - - PREDICTED: GTPase Era, mitochondrial [Jatropha curcas]
5 Hb_002984_020 0.2446487483 - - hypothetical protein EUGRSUZ_J02661 [Eucalyptus grandis]
6 Hb_068307_010 0.2573829101 - - PREDICTED: phosphomannomutase [Eucalyptus grandis]
7 Hb_001506_030 0.2615714779 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
8 Hb_102437_010 0.2664519562 - - PREDICTED: B-cell receptor-associated protein 31 [Beta vulgaris subsp. vulgaris]
9 Hb_070541_030 0.2686008431 - - -
10 Hb_029622_070 0.2735454128 - - -
11 Hb_001208_020 0.2769551362 - - -
12 Hb_003894_090 0.2789738981 - - conserved hypothetical protein [Ricinus communis]
13 Hb_187739_010 0.2790960367 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
14 Hb_000732_240 0.280627921 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
15 Hb_001459_040 0.2812773727 - - Ankyrin repeat-containing protein [Medicago truncatula]
16 Hb_137349_010 0.2829309264 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
17 Hb_000164_130 0.2857953065 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
18 Hb_008643_020 0.2858222537 - - Cf-4/9 disease resistance-like family protein [Populus trichocarpa]
19 Hb_009372_050 0.2869971993 - - unnamed protein product [Vitis vinifera]
20 Hb_000808_120 0.2882989779 - - -

Gene co-expression network

sample Hb_163400_010 Hb_163400_010 Hb_053073_010 Hb_053073_010 Hb_163400_010--Hb_053073_010 Hb_186304_010 Hb_186304_010 Hb_163400_010--Hb_186304_010 Hb_044653_010 Hb_044653_010 Hb_163400_010--Hb_044653_010 Hb_002984_020 Hb_002984_020 Hb_163400_010--Hb_002984_020 Hb_068307_010 Hb_068307_010 Hb_163400_010--Hb_068307_010 Hb_001506_030 Hb_001506_030 Hb_163400_010--Hb_001506_030 Hb_001208_020 Hb_001208_020 Hb_053073_010--Hb_001208_020 Hb_002965_180 Hb_002965_180 Hb_053073_010--Hb_002965_180 Hb_001459_040 Hb_001459_040 Hb_053073_010--Hb_001459_040 Hb_149194_010 Hb_149194_010 Hb_053073_010--Hb_149194_010 Hb_014705_010 Hb_014705_010 Hb_053073_010--Hb_014705_010 Hb_070541_030 Hb_070541_030 Hb_186304_010--Hb_070541_030 Hb_102437_010 Hb_102437_010 Hb_186304_010--Hb_102437_010 Hb_182249_010 Hb_182249_010 Hb_186304_010--Hb_182249_010 Hb_134488_010 Hb_134488_010 Hb_186304_010--Hb_134488_010 Hb_071781_010 Hb_071781_010 Hb_186304_010--Hb_071781_010 Hb_044653_010--Hb_001506_030 Hb_125948_010 Hb_125948_010 Hb_044653_010--Hb_125948_010 Hb_000122_060 Hb_000122_060 Hb_044653_010--Hb_000122_060 Hb_044653_010--Hb_070541_030 Hb_014361_050 Hb_014361_050 Hb_044653_010--Hb_014361_050 Hb_007951_090 Hb_007951_090 Hb_002984_020--Hb_007951_090 Hb_003925_130 Hb_003925_130 Hb_002984_020--Hb_003925_130 Hb_072290_010 Hb_072290_010 Hb_002984_020--Hb_072290_010 Hb_010810_040 Hb_010810_040 Hb_002984_020--Hb_010810_040 Hb_000304_040 Hb_000304_040 Hb_002984_020--Hb_000304_040 Hb_178711_010 Hb_178711_010 Hb_002984_020--Hb_178711_010 Hb_002186_030 Hb_002186_030 Hb_068307_010--Hb_002186_030 Hb_004648_020 Hb_004648_020 Hb_068307_010--Hb_004648_020 Hb_002233_080 Hb_002233_080 Hb_068307_010--Hb_002233_080 Hb_002626_060 Hb_002626_060 Hb_068307_010--Hb_002626_060 Hb_001221_050 Hb_001221_050 Hb_068307_010--Hb_001221_050 Hb_001115_100 Hb_001115_100 Hb_068307_010--Hb_001115_100 Hb_001506_030--Hb_186304_010 Hb_076233_020 Hb_076233_020 Hb_001506_030--Hb_076233_020 Hb_001506_030--Hb_000122_060 Hb_001506_030--Hb_014361_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0931814 0.111559 0.185642 0.0345673 0.0653897
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis