Hb_014361_050

Information

Type -
Description -
Location Contig14361: 38210-41109
Sequence    

Annotation

kegg
ID pop:POPTR_0007s10140g
description hypothetical protein
nr
ID XP_012079363.1
description PREDICTED: uncharacterized protein ycf36 isoform X1 [Jatropha curcas]
swissprot
ID P51273
description Uncharacterized protein ycf36 OS=Porphyra purpurea GN=ycf36 PE=3 SV=1
trembl
ID A0A067KJN4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12505 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014361_050 0.0 - - PREDICTED: uncharacterized protein ycf36 isoform X1 [Jatropha curcas]
2 Hb_000997_010 0.0693665987 - - PREDICTED: FHA domain-containing protein At4g14490 isoform X2 [Jatropha curcas]
3 Hb_015928_020 0.1454558827 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
4 Hb_061466_020 0.1734707728 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
5 Hb_076233_020 0.1762221326 transcription factor TF Family: C2H2 PREDICTED: dnaJ homolog subfamily C member 21 [Populus euphratica]
6 Hb_006286_010 0.2006830867 - - hypothetical protein PRUPE_ppa017148mg [Prunus persica]
7 Hb_055339_010 0.2064959522 - - EARLY-RESPONSIVE TO DEHYDRATION 7 family protein [Populus trichocarpa]
8 Hb_004570_050 0.2213245894 - - kinase, putative [Ricinus communis]
9 Hb_005517_010 0.2254000898 - - Chorismate mutase, chloroplast precursor, putative [Ricinus communis]
10 Hb_008203_020 0.225799194 - - protein kinase, putative [Ricinus communis]
11 Hb_074184_010 0.2300714782 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
12 Hb_000834_240 0.2443120687 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
13 Hb_182249_010 0.2450562339 - - -
14 Hb_129459_010 0.2463636725 - - PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like [Populus euphratica]
15 Hb_011161_030 0.2492822592 - - PREDICTED: uncharacterized protein LOC105638906 [Jatropha curcas]
16 Hb_005155_020 0.2505466854 - - -
17 Hb_004994_130 0.2620633338 transcription factor TF Family: MYB PREDICTED: myb-like protein M [Jatropha curcas]
18 Hb_001950_020 0.262976159 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
19 Hb_000189_430 0.2659757513 - - unnamed protein product [Vitis vinifera]
20 Hb_000258_360 0.2676221458 - - PREDICTED: uncharacterized protein LOC104455487 [Eucalyptus grandis]

Gene co-expression network

sample Hb_014361_050 Hb_014361_050 Hb_000997_010 Hb_000997_010 Hb_014361_050--Hb_000997_010 Hb_015928_020 Hb_015928_020 Hb_014361_050--Hb_015928_020 Hb_061466_020 Hb_061466_020 Hb_014361_050--Hb_061466_020 Hb_076233_020 Hb_076233_020 Hb_014361_050--Hb_076233_020 Hb_006286_010 Hb_006286_010 Hb_014361_050--Hb_006286_010 Hb_055339_010 Hb_055339_010 Hb_014361_050--Hb_055339_010 Hb_000997_010--Hb_061466_020 Hb_000997_010--Hb_076233_020 Hb_000997_010--Hb_055339_010 Hb_000997_010--Hb_015928_020 Hb_004570_050 Hb_004570_050 Hb_000997_010--Hb_004570_050 Hb_015928_020--Hb_061466_020 Hb_008203_020 Hb_008203_020 Hb_015928_020--Hb_008203_020 Hb_074184_010 Hb_074184_010 Hb_015928_020--Hb_074184_010 Hb_015928_020--Hb_006286_010 Hb_167508_010 Hb_167508_010 Hb_061466_020--Hb_167508_010 Hb_129459_010 Hb_129459_010 Hb_061466_020--Hb_129459_010 Hb_005517_010 Hb_005517_010 Hb_061466_020--Hb_005517_010 Hb_076233_020--Hb_055339_010 Hb_076233_020--Hb_004570_050 Hb_057247_010 Hb_057247_010 Hb_076233_020--Hb_057247_010 Hb_169329_010 Hb_169329_010 Hb_076233_020--Hb_169329_010 Hb_009476_150 Hb_009476_150 Hb_006286_010--Hb_009476_150 Hb_102437_010 Hb_102437_010 Hb_006286_010--Hb_102437_010 Hb_002196_010 Hb_002196_010 Hb_006286_010--Hb_002196_010 Hb_006286_010--Hb_000997_010 Hb_000438_150 Hb_000438_150 Hb_006286_010--Hb_000438_150 Hb_055339_010--Hb_004570_050 Hb_036693_010 Hb_036693_010 Hb_055339_010--Hb_036693_010 Hb_007188_060 Hb_007188_060 Hb_055339_010--Hb_007188_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0531257 0.124703 0.099804 0.0697107 0.0498177 0.0703621
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis