Hb_006286_010

Information

Type -
Description -
Location Contig6286: 9823-13070
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa017148mg
description hypothetical protein
nr
ID XP_007214117.1
description hypothetical protein PRUPE_ppa017148mg [Prunus persica]
swissprot
ID P93194
description Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2
trembl
ID M5WQ03
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017148mg PE=4 SV=1
Gene Ontology
ID GO:0016740
description leucine-rich repeat protein kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51766: 12945-14101
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006286_010 0.0 - - hypothetical protein PRUPE_ppa017148mg [Prunus persica]
2 Hb_009476_150 0.1898436114 transcription factor TF Family: MYB PREDICTED: transcriptional activator Myb-like [Jatropha curcas]
3 Hb_014361_050 0.2006830867 - - PREDICTED: uncharacterized protein ycf36 isoform X1 [Jatropha curcas]
4 Hb_102437_010 0.2038433859 - - PREDICTED: B-cell receptor-associated protein 31 [Beta vulgaris subsp. vulgaris]
5 Hb_002196_010 0.2075042207 - - PREDICTED: LOW QUALITY PROTEIN: proline-rich receptor-like protein kinase PERK1 [Jatropha curcas]
6 Hb_000997_010 0.2085213735 - - PREDICTED: FHA domain-containing protein At4g14490 isoform X2 [Jatropha curcas]
7 Hb_000438_150 0.20920188 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7 [Jatropha curcas]
8 Hb_012258_020 0.2196662414 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
9 Hb_000732_240 0.2259591688 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
10 Hb_061466_020 0.2273301722 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
11 Hb_182249_010 0.2295837038 - - -
12 Hb_015928_020 0.2296957326 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
13 Hb_009393_200 0.2306866231 - - PREDICTED: F-box only protein 13 [Jatropha curcas]
14 Hb_067197_030 0.2324241907 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Jatropha curcas]
15 Hb_003835_090 0.2330427769 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
16 Hb_004374_130 0.2387034625 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
17 Hb_004052_160 0.2391083943 - - Chain A, Rna Binding Protein
18 Hb_000594_110 0.240413568 transcription factor TF Family: RAV DNA-binding protein RAV1, putative [Ricinus communis]
19 Hb_005548_030 0.241384943 - - hypothetical protein JCGZ_05606 [Jatropha curcas]
20 Hb_000914_050 0.2422695768 - - PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]

Gene co-expression network

sample Hb_006286_010 Hb_006286_010 Hb_009476_150 Hb_009476_150 Hb_006286_010--Hb_009476_150 Hb_014361_050 Hb_014361_050 Hb_006286_010--Hb_014361_050 Hb_102437_010 Hb_102437_010 Hb_006286_010--Hb_102437_010 Hb_002196_010 Hb_002196_010 Hb_006286_010--Hb_002196_010 Hb_000997_010 Hb_000997_010 Hb_006286_010--Hb_000997_010 Hb_000438_150 Hb_000438_150 Hb_006286_010--Hb_000438_150 Hb_009476_150--Hb_000438_150 Hb_012258_020 Hb_012258_020 Hb_009476_150--Hb_012258_020 Hb_002233_070 Hb_002233_070 Hb_009476_150--Hb_002233_070 Hb_001357_280 Hb_001357_280 Hb_009476_150--Hb_001357_280 Hb_000732_240 Hb_000732_240 Hb_009476_150--Hb_000732_240 Hb_014361_050--Hb_000997_010 Hb_015928_020 Hb_015928_020 Hb_014361_050--Hb_015928_020 Hb_061466_020 Hb_061466_020 Hb_014361_050--Hb_061466_020 Hb_076233_020 Hb_076233_020 Hb_014361_050--Hb_076233_020 Hb_055339_010 Hb_055339_010 Hb_014361_050--Hb_055339_010 Hb_000594_110 Hb_000594_110 Hb_102437_010--Hb_000594_110 Hb_041895_040 Hb_041895_040 Hb_102437_010--Hb_041895_040 Hb_000003_740 Hb_000003_740 Hb_102437_010--Hb_000003_740 Hb_005394_010 Hb_005394_010 Hb_102437_010--Hb_005394_010 Hb_182249_010 Hb_182249_010 Hb_102437_010--Hb_182249_010 Hb_102437_010--Hb_012258_020 Hb_001622_010 Hb_001622_010 Hb_002196_010--Hb_001622_010 Hb_005464_030 Hb_005464_030 Hb_002196_010--Hb_005464_030 Hb_006420_020 Hb_006420_020 Hb_002196_010--Hb_006420_020 Hb_080147_080 Hb_080147_080 Hb_002196_010--Hb_080147_080 Hb_001865_040 Hb_001865_040 Hb_002196_010--Hb_001865_040 Hb_009393_200 Hb_009393_200 Hb_002196_010--Hb_009393_200 Hb_000997_010--Hb_061466_020 Hb_000997_010--Hb_076233_020 Hb_000997_010--Hb_055339_010 Hb_000997_010--Hb_015928_020 Hb_004570_050 Hb_004570_050 Hb_000997_010--Hb_004570_050 Hb_000099_190 Hb_000099_190 Hb_000438_150--Hb_000099_190 Hb_000438_150--Hb_000732_240 Hb_048944_020 Hb_048944_020 Hb_000438_150--Hb_048944_020 Hb_000438_150--Hb_002196_010 Hb_007157_060 Hb_007157_060 Hb_000438_150--Hb_007157_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.55961 0.981099 0.998697 1.21541 0.431731 0.321526
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0226942 0.0357129 0 0.00710442 0.0754631

CAGE analysis