Hb_186304_010

Information

Type -
Description -
Location Contig186304: 665-892
Sequence    

Annotation

kegg
ID cam:101499378
description non-lysosomal glucosylceramidase-like
nr
ID XP_012066711.1
description PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LD96
description Non-lysosomal glucosylceramidase OS=Jatropha curcas GN=JCGZ_00267 PE=3 SV=1
Gene Ontology
ID GO:0005794
description non-lysosomal glucosylceramidase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_186304_010 0.0 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]
2 Hb_163400_010 0.2088193678 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
3 Hb_070541_030 0.2225183606 - - -
4 Hb_102437_010 0.2336050463 - - PREDICTED: B-cell receptor-associated protein 31 [Beta vulgaris subsp. vulgaris]
5 Hb_182249_010 0.2440421988 - - -
6 Hb_134488_010 0.255238111 - - -
7 Hb_071781_010 0.2566066761 - - hypothetical protein POPTR_0010s13190g [Populus trichocarpa]
8 Hb_177152_010 0.2570470308 - - glycosyl hydrolase family 38 family protein [Populus trichocarpa]
9 Hb_145317_010 0.262634286 - - PREDICTED: transmembrane 9 superfamily member 11 [Jatropha curcas]
10 Hb_000179_180 0.2642663756 - - hypothetical protein EUGRSUZ_C031461, partial [Eucalyptus grandis]
11 Hb_001506_030 0.2695418389 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
12 Hb_106688_010 0.2707599823 - - aspartyl-tRNA synthetase, putative [Ricinus communis]
13 Hb_057247_010 0.273081575 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
14 Hb_018691_010 0.2836296164 - - -
15 Hb_068804_080 0.2850064188 - - PREDICTED: protein BRICK 1 [Jatropha curcas]
16 Hb_007441_090 0.2861287223 - - nucleoside diphosphate kinase 1 [Hevea brasiliensis]
17 Hb_154538_010 0.2869472654 - - -
18 Hb_000732_240 0.2886776284 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
19 Hb_040747_010 0.2898558672 - - hypothetical protein POPTR_0009s15120g [Populus trichocarpa]
20 Hb_044653_010 0.2921159251 - - PREDICTED: GTPase Era, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_186304_010 Hb_186304_010 Hb_163400_010 Hb_163400_010 Hb_186304_010--Hb_163400_010 Hb_070541_030 Hb_070541_030 Hb_186304_010--Hb_070541_030 Hb_102437_010 Hb_102437_010 Hb_186304_010--Hb_102437_010 Hb_182249_010 Hb_182249_010 Hb_186304_010--Hb_182249_010 Hb_134488_010 Hb_134488_010 Hb_186304_010--Hb_134488_010 Hb_071781_010 Hb_071781_010 Hb_186304_010--Hb_071781_010 Hb_053073_010 Hb_053073_010 Hb_163400_010--Hb_053073_010 Hb_044653_010 Hb_044653_010 Hb_163400_010--Hb_044653_010 Hb_002984_020 Hb_002984_020 Hb_163400_010--Hb_002984_020 Hb_068307_010 Hb_068307_010 Hb_163400_010--Hb_068307_010 Hb_001506_030 Hb_001506_030 Hb_163400_010--Hb_001506_030 Hb_004611_060 Hb_004611_060 Hb_070541_030--Hb_004611_060 Hb_001103_070 Hb_001103_070 Hb_070541_030--Hb_001103_070 Hb_145317_010 Hb_145317_010 Hb_070541_030--Hb_145317_010 Hb_000732_240 Hb_000732_240 Hb_070541_030--Hb_000732_240 Hb_035761_010 Hb_035761_010 Hb_070541_030--Hb_035761_010 Hb_000594_110 Hb_000594_110 Hb_102437_010--Hb_000594_110 Hb_041895_040 Hb_041895_040 Hb_102437_010--Hb_041895_040 Hb_000003_740 Hb_000003_740 Hb_102437_010--Hb_000003_740 Hb_005394_010 Hb_005394_010 Hb_102437_010--Hb_005394_010 Hb_102437_010--Hb_182249_010 Hb_012258_020 Hb_012258_020 Hb_102437_010--Hb_012258_020 Hb_004052_160 Hb_004052_160 Hb_182249_010--Hb_004052_160 Hb_000122_010 Hb_000122_010 Hb_182249_010--Hb_000122_010 Hb_000179_180 Hb_000179_180 Hb_182249_010--Hb_000179_180 Hb_004570_050 Hb_004570_050 Hb_182249_010--Hb_004570_050 Hb_009393_200 Hb_009393_200 Hb_182249_010--Hb_009393_200 Hb_025905_020 Hb_025905_020 Hb_134488_010--Hb_025905_020 Hb_068804_080 Hb_068804_080 Hb_134488_010--Hb_068804_080 Hb_177152_010 Hb_177152_010 Hb_134488_010--Hb_177152_010 Hb_169329_010 Hb_169329_010 Hb_134488_010--Hb_169329_010 Hb_041025_010 Hb_041025_010 Hb_134488_010--Hb_041025_010 Hb_178620_010 Hb_178620_010 Hb_134488_010--Hb_178620_010 Hb_008119_030 Hb_008119_030 Hb_071781_010--Hb_008119_030 Hb_000742_190 Hb_000742_190 Hb_071781_010--Hb_000742_190 Hb_002900_100 Hb_002900_100 Hb_071781_010--Hb_002900_100 Hb_002675_090 Hb_002675_090 Hb_071781_010--Hb_002675_090 Hb_003605_040 Hb_003605_040 Hb_071781_010--Hb_003605_040 Hb_000808_120 Hb_000808_120 Hb_071781_010--Hb_000808_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.5073 681.198 906.683 1179.43 302.478 867.156
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
108.669 0 0 134.446 0

CAGE analysis