Hb_014705_010

Information

Type -
Description -
Location Contig14705: 110-1296
Sequence    

Annotation

kegg
ID rcu:RCOM_1216390
description ATP-binding cassette transporter, putative (EC:3.6.3.28)
nr
ID KDP26073.1
description hypothetical protein JCGZ_21106 [Jatropha curcas]
swissprot
ID Q8RWI9
description ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2
trembl
ID A0A067JTB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21106 PE=3 SV=1
Gene Ontology
ID GO:0016020
description abc transporter g family member 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014705_010 0.0 - - hypothetical protein JCGZ_21106 [Jatropha curcas]
2 Hb_003086_160 0.1645737758 - - hypothetical protein POPTR_0006s21590g [Populus trichocarpa]
3 Hb_033720_030 0.1738312889 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
4 Hb_011861_130 0.1760193555 - - PREDICTED: uncharacterized protein LOC105634795 [Jatropha curcas]
5 Hb_000022_080 0.1764149872 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
6 Hb_004195_070 0.1792035276 - - cytochrome P450, putative [Ricinus communis]
7 Hb_107658_010 0.1802668029 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X2 [Jatropha curcas]
8 Hb_004319_010 0.1819516728 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
9 Hb_000190_160 0.1825232874 - - PREDICTED: uncharacterized protein LOC105649940 isoform X2 [Jatropha curcas]
10 Hb_000270_050 0.1845038298 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
11 Hb_004453_060 0.1881699071 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
12 Hb_002267_060 0.1891365459 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
13 Hb_143629_120 0.1929535021 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
14 Hb_004732_070 0.1943720588 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005211_170 0.1951401755 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
16 Hb_002417_010 0.1963638878 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
17 Hb_000310_040 0.1965209686 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
18 Hb_150573_010 0.1966726912 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
19 Hb_000977_200 0.197604329 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Jatropha curcas]
20 Hb_097292_010 0.1981302642 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]

Gene co-expression network

sample Hb_014705_010 Hb_014705_010 Hb_003086_160 Hb_003086_160 Hb_014705_010--Hb_003086_160 Hb_033720_030 Hb_033720_030 Hb_014705_010--Hb_033720_030 Hb_011861_130 Hb_011861_130 Hb_014705_010--Hb_011861_130 Hb_000022_080 Hb_000022_080 Hb_014705_010--Hb_000022_080 Hb_004195_070 Hb_004195_070 Hb_014705_010--Hb_004195_070 Hb_107658_010 Hb_107658_010 Hb_014705_010--Hb_107658_010 Hb_002267_060 Hb_002267_060 Hb_003086_160--Hb_002267_060 Hb_003086_160--Hb_033720_030 Hb_000321_170 Hb_000321_170 Hb_003086_160--Hb_000321_170 Hb_003086_160--Hb_000022_080 Hb_012286_060 Hb_012286_060 Hb_003086_160--Hb_012286_060 Hb_028487_060 Hb_028487_060 Hb_003086_160--Hb_028487_060 Hb_002276_080 Hb_002276_080 Hb_033720_030--Hb_002276_080 Hb_162472_010 Hb_162472_010 Hb_033720_030--Hb_162472_010 Hb_033720_030--Hb_004195_070 Hb_004223_060 Hb_004223_060 Hb_033720_030--Hb_004223_060 Hb_000922_400 Hb_000922_400 Hb_033720_030--Hb_000922_400 Hb_001025_130 Hb_001025_130 Hb_033720_030--Hb_001025_130 Hb_001288_040 Hb_001288_040 Hb_011861_130--Hb_001288_040 Hb_000878_080 Hb_000878_080 Hb_011861_130--Hb_000878_080 Hb_004880_040 Hb_004880_040 Hb_011861_130--Hb_004880_040 Hb_097292_010 Hb_097292_010 Hb_011861_130--Hb_097292_010 Hb_003750_090 Hb_003750_090 Hb_011861_130--Hb_003750_090 Hb_002203_010 Hb_002203_010 Hb_011861_130--Hb_002203_010 Hb_005496_040 Hb_005496_040 Hb_000022_080--Hb_005496_040 Hb_002045_210 Hb_002045_210 Hb_000022_080--Hb_002045_210 Hb_000022_080--Hb_004195_070 Hb_000022_080--Hb_000321_170 Hb_000441_130 Hb_000441_130 Hb_000022_080--Hb_000441_130 Hb_002818_060 Hb_002818_060 Hb_000022_080--Hb_002818_060 Hb_004195_070--Hb_162472_010 Hb_004195_070--Hb_001025_130 Hb_026218_010 Hb_026218_010 Hb_004195_070--Hb_026218_010 Hb_006483_070 Hb_006483_070 Hb_004195_070--Hb_006483_070 Hb_000011_260 Hb_000011_260 Hb_107658_010--Hb_000011_260 Hb_150573_010 Hb_150573_010 Hb_107658_010--Hb_150573_010 Hb_001369_190 Hb_001369_190 Hb_107658_010--Hb_001369_190 Hb_036029_020 Hb_036029_020 Hb_107658_010--Hb_036029_020 Hb_004732_070 Hb_004732_070 Hb_107658_010--Hb_004732_070 Hb_004453_060 Hb_004453_060 Hb_107658_010--Hb_004453_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.349908 1.63365 8.54055 12.6533 0.692604 1.00106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0940013 1.33786

CAGE analysis