Hb_097292_010

Information

Type -
Description -
Location Contig97292: 3985-4672
Sequence    

Annotation

kegg
ID pop:POPTR_0014s17490g
description POPTRDRAFT_247314; hypothetical protein
nr
ID XP_012084640.1
description PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDE8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15083 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_097292_010 0.0 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
2 Hb_007846_030 0.052226307 - - Uncharacterized protein TCM_021839 [Theobroma cacao]
3 Hb_005731_040 0.0655638338 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
4 Hb_000861_060 0.0756552188 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
5 Hb_000586_110 0.0776341345 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
6 Hb_007426_190 0.0776891234 - - PREDICTED: uncharacterized protein LOC103325200 [Prunus mume]
7 Hb_000878_080 0.0835084647 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
8 Hb_003598_020 0.1003705544 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12 [Jatropha curcas]
9 Hb_000227_300 0.1071219322 - - conserved hypothetical protein [Ricinus communis]
10 Hb_026218_010 0.1104085974 - - conserved hypothetical protein [Ricinus communis]
11 Hb_011861_130 0.1150443265 - - PREDICTED: uncharacterized protein LOC105634795 [Jatropha curcas]
12 Hb_004880_040 0.1159654922 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
13 Hb_005694_170 0.1252204589 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
14 Hb_001025_130 0.1274967504 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
15 Hb_001329_050 0.12769411 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002028_270 0.1277627451 - - Pectinesterase-1 precursor, putative [Ricinus communis]
17 Hb_059275_010 0.1280932685 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
18 Hb_003376_110 0.1292077626 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002894_060 0.1349241032 - - respiratory burst oxidase D [Manihot esculenta]
20 Hb_001709_120 0.1358988882 - - hypothetical protein RCOM_1313640 [Ricinus communis]

Gene co-expression network

sample Hb_097292_010 Hb_097292_010 Hb_007846_030 Hb_007846_030 Hb_097292_010--Hb_007846_030 Hb_005731_040 Hb_005731_040 Hb_097292_010--Hb_005731_040 Hb_000861_060 Hb_000861_060 Hb_097292_010--Hb_000861_060 Hb_000586_110 Hb_000586_110 Hb_097292_010--Hb_000586_110 Hb_007426_190 Hb_007426_190 Hb_097292_010--Hb_007426_190 Hb_000878_080 Hb_000878_080 Hb_097292_010--Hb_000878_080 Hb_007846_030--Hb_007426_190 Hb_005694_170 Hb_005694_170 Hb_007846_030--Hb_005694_170 Hb_007846_030--Hb_005731_040 Hb_003376_110 Hb_003376_110 Hb_007846_030--Hb_003376_110 Hb_007846_030--Hb_000878_080 Hb_005731_040--Hb_000586_110 Hb_003598_020 Hb_003598_020 Hb_005731_040--Hb_003598_020 Hb_026218_010 Hb_026218_010 Hb_005731_040--Hb_026218_010 Hb_005731_040--Hb_000861_060 Hb_000861_060--Hb_007426_190 Hb_000227_300 Hb_000227_300 Hb_000861_060--Hb_000227_300 Hb_000861_060--Hb_000586_110 Hb_000310_040 Hb_000310_040 Hb_000861_060--Hb_000310_040 Hb_000586_110--Hb_026218_010 Hb_001025_130 Hb_001025_130 Hb_000586_110--Hb_001025_130 Hb_002636_120 Hb_002636_120 Hb_000586_110--Hb_002636_120 Hb_007426_190--Hb_000227_300 Hb_007426_190--Hb_005731_040 Hb_051408_010 Hb_051408_010 Hb_007426_190--Hb_051408_010 Hb_002028_270 Hb_002028_270 Hb_000878_080--Hb_002028_270 Hb_001856_210 Hb_001856_210 Hb_000878_080--Hb_001856_210 Hb_002894_060 Hb_002894_060 Hb_000878_080--Hb_002894_060 Hb_002203_010 Hb_002203_010 Hb_000878_080--Hb_002203_010 Hb_004005_060 Hb_004005_060 Hb_000878_080--Hb_004005_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.90806 24.88 30.5249 0.0829117 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0991658 4.51354

CAGE analysis