Hb_000861_060

Information

Type -
Description -
Location Contig861: 30967-33686
Sequence    

Annotation

kegg
ID vvi:100260649
description caffeic acid 3-O-methyltransferase-like
nr
ID XP_012068744.1
description PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
swissprot
ID Q43609
description Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1
trembl
ID A0A067LR65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03912 PE=4 SV=1
Gene Ontology
ID GO:0046983
description caffeic acid 3-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60819: 31244-32840
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000861_060 0.0 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
2 Hb_007426_190 0.0744745424 - - PREDICTED: uncharacterized protein LOC103325200 [Prunus mume]
3 Hb_097292_010 0.0756552188 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
4 Hb_000227_300 0.076641185 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000586_110 0.079811751 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
6 Hb_005731_040 0.0890953591 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
7 Hb_000310_040 0.0954207118 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
8 Hb_084812_010 0.0982761373 - - PREDICTED: putative RING-H2 finger protein ATL21B [Vitis vinifera]
9 Hb_004531_130 0.101809313 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X2 [Jatropha curcas]
10 Hb_007846_030 0.1031940574 - - Uncharacterized protein TCM_021839 [Theobroma cacao]
11 Hb_000739_190 0.1082070245 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
12 Hb_050898_030 0.1086592289 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000878_080 0.1112395838 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
14 Hb_026218_010 0.111564802 - - conserved hypothetical protein [Ricinus communis]
15 Hb_059275_010 0.1176291418 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
16 Hb_089040_010 0.1211864286 - - Glycosyl hydrolase family protein isoform 1 [Theobroma cacao]
17 Hb_002417_010 0.1219368084 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
18 Hb_016911_010 0.1222015298 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
19 Hb_001025_130 0.1226303917 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
20 Hb_000684_110 0.1240215577 - - hypothetical protein POPTR_0006s13250g [Populus trichocarpa]

Gene co-expression network

sample Hb_000861_060 Hb_000861_060 Hb_007426_190 Hb_007426_190 Hb_000861_060--Hb_007426_190 Hb_097292_010 Hb_097292_010 Hb_000861_060--Hb_097292_010 Hb_000227_300 Hb_000227_300 Hb_000861_060--Hb_000227_300 Hb_000586_110 Hb_000586_110 Hb_000861_060--Hb_000586_110 Hb_005731_040 Hb_005731_040 Hb_000861_060--Hb_005731_040 Hb_000310_040 Hb_000310_040 Hb_000861_060--Hb_000310_040 Hb_007426_190--Hb_000227_300 Hb_007846_030 Hb_007846_030 Hb_007426_190--Hb_007846_030 Hb_007426_190--Hb_097292_010 Hb_007426_190--Hb_005731_040 Hb_051408_010 Hb_051408_010 Hb_007426_190--Hb_051408_010 Hb_097292_010--Hb_007846_030 Hb_097292_010--Hb_005731_040 Hb_097292_010--Hb_000586_110 Hb_000878_080 Hb_000878_080 Hb_097292_010--Hb_000878_080 Hb_000227_300--Hb_051408_010 Hb_009070_010 Hb_009070_010 Hb_000227_300--Hb_009070_010 Hb_004531_130 Hb_004531_130 Hb_000227_300--Hb_004531_130 Hb_000227_300--Hb_097292_010 Hb_026218_010 Hb_026218_010 Hb_000586_110--Hb_026218_010 Hb_000586_110--Hb_005731_040 Hb_001025_130 Hb_001025_130 Hb_000586_110--Hb_001025_130 Hb_002636_120 Hb_002636_120 Hb_000586_110--Hb_002636_120 Hb_003598_020 Hb_003598_020 Hb_005731_040--Hb_003598_020 Hb_005731_040--Hb_026218_010 Hb_005731_040--Hb_007846_030 Hb_039075_010 Hb_039075_010 Hb_000310_040--Hb_039075_010 Hb_000333_140 Hb_000333_140 Hb_000310_040--Hb_000333_140 Hb_005211_170 Hb_005211_170 Hb_000310_040--Hb_005211_170 Hb_030360_010 Hb_030360_010 Hb_000310_040--Hb_030360_010 Hb_004732_070 Hb_004732_070 Hb_000310_040--Hb_004732_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.01704 8.09479 13.257 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.148396 1.75762

CAGE analysis