Hb_000333_140

Information

Type -
Description -
Location Contig333: 132216-134832
Sequence    

Annotation

kegg
ID rcu:RCOM_0711510
description Xylem serine proteinase 1 precursor, putative (EC:3.4.21.25)
nr
ID XP_012077058.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067KCQ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07493 PE=4 SV=1
Gene Ontology
ID GO:0005794
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34941: 132343-134861
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000333_140 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_011628_010 0.0575375778 - - tonoplast intrinsic protein, putative [Ricinus communis]
3 Hb_005211_170 0.0680597161 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
4 Hb_001136_080 0.0681144067 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
5 Hb_015292_020 0.0690450414 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_002307_150 0.0708305335 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
7 Hb_000310_040 0.0824597173 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
8 Hb_004705_060 0.0860240823 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
9 Hb_016911_010 0.0897788585 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
10 Hb_039075_010 0.0914528503 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
11 Hb_001709_120 0.0920704453 - - hypothetical protein RCOM_1313640 [Ricinus communis]
12 Hb_009367_070 0.0996908787 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
13 Hb_009062_020 0.1012159656 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]
14 Hb_030360_010 0.1032081358 - - -
15 Hb_009252_080 0.10347214 - - Polygalacturonase-1 non-catalytic subunit beta precursor, putative [Ricinus communis]
16 Hb_004933_010 0.1056643983 - - hypothetical protein POPTR_0018s10810g [Populus trichocarpa]
17 Hb_001025_130 0.1061028501 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
18 Hb_004112_080 0.1061309569 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
19 Hb_010080_050 0.1082798738 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
20 Hb_050898_030 0.1084190225 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000333_140 Hb_000333_140 Hb_011628_010 Hb_011628_010 Hb_000333_140--Hb_011628_010 Hb_005211_170 Hb_005211_170 Hb_000333_140--Hb_005211_170 Hb_001136_080 Hb_001136_080 Hb_000333_140--Hb_001136_080 Hb_015292_020 Hb_015292_020 Hb_000333_140--Hb_015292_020 Hb_002307_150 Hb_002307_150 Hb_000333_140--Hb_002307_150 Hb_000310_040 Hb_000310_040 Hb_000333_140--Hb_000310_040 Hb_011628_010--Hb_001136_080 Hb_011628_010--Hb_002307_150 Hb_011628_010--Hb_005211_170 Hb_009367_070 Hb_009367_070 Hb_011628_010--Hb_009367_070 Hb_039075_010 Hb_039075_010 Hb_011628_010--Hb_039075_010 Hb_005211_170--Hb_002307_150 Hb_010080_050 Hb_010080_050 Hb_005211_170--Hb_010080_050 Hb_000445_260 Hb_000445_260 Hb_005211_170--Hb_000445_260 Hb_005211_170--Hb_000310_040 Hb_016911_010 Hb_016911_010 Hb_001136_080--Hb_016911_010 Hb_009062_020 Hb_009062_020 Hb_001136_080--Hb_009062_020 Hb_006483_070 Hb_006483_070 Hb_001136_080--Hb_006483_070 Hb_001709_120 Hb_001709_120 Hb_001136_080--Hb_001709_120 Hb_015292_020--Hb_001709_120 Hb_001025_130 Hb_001025_130 Hb_015292_020--Hb_001025_130 Hb_002902_060 Hb_002902_060 Hb_015292_020--Hb_002902_060 Hb_015292_020--Hb_016911_010 Hb_007122_020 Hb_007122_020 Hb_015292_020--Hb_007122_020 Hb_002307_150--Hb_010080_050 Hb_001971_040 Hb_001971_040 Hb_002307_150--Hb_001971_040 Hb_002028_270 Hb_002028_270 Hb_002307_150--Hb_002028_270 Hb_000310_040--Hb_039075_010 Hb_030360_010 Hb_030360_010 Hb_000310_040--Hb_030360_010 Hb_004732_070 Hb_004732_070 Hb_000310_040--Hb_004732_070 Hb_000861_060 Hb_000861_060 Hb_000310_040--Hb_000861_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0975622 2.31518 18.0358 38.9199 0.153882 0.0568801
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0137538 0.0262252 1.46908 4.2693

CAGE analysis