Hb_001136_080

Information

Type -
Description -
Location Contig1136: 79747-81201
Sequence    

Annotation

kegg
ID pop:POPTR_0010s13830g
description POPTRDRAFT_566655; aspartyl protease family protein
nr
ID XP_012082051.1
description PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
swissprot
ID Q9LS40
description Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1
trembl
ID A0A067K2W2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18299 PE=4 SV=1
Gene Ontology
ID GO:0004190
description protein aspartic protease in guard cell 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001136_080 0.0 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
2 Hb_000333_140 0.0681144067 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
3 Hb_016911_010 0.0721192338 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
4 Hb_009062_020 0.0771489346 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]
5 Hb_011628_010 0.0801218598 - - tonoplast intrinsic protein, putative [Ricinus communis]
6 Hb_006483_070 0.0846861889 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
7 Hb_001709_120 0.0858150207 - - hypothetical protein RCOM_1313640 [Ricinus communis]
8 Hb_001775_140 0.0875149243 - - Phytosulfokine 3 precursor, putative isoform 2 [Theobroma cacao]
9 Hb_015292_020 0.0897529401 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_005211_170 0.0953133965 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
11 Hb_001025_130 0.1027521871 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
12 Hb_002307_150 0.1029174292 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
13 Hb_000445_260 0.106461684 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
14 Hb_000310_040 0.107826502 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
15 Hb_001856_210 0.1103531548 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
16 Hb_005731_040 0.1110841995 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
17 Hb_089040_010 0.1111124179 - - Glycosyl hydrolase family protein isoform 1 [Theobroma cacao]
18 Hb_039075_010 0.1123565122 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
19 Hb_004933_010 0.1133945278 - - hypothetical protein POPTR_0018s10810g [Populus trichocarpa]
20 Hb_003598_020 0.1140228566 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12 [Jatropha curcas]

Gene co-expression network

sample Hb_001136_080 Hb_001136_080 Hb_000333_140 Hb_000333_140 Hb_001136_080--Hb_000333_140 Hb_016911_010 Hb_016911_010 Hb_001136_080--Hb_016911_010 Hb_009062_020 Hb_009062_020 Hb_001136_080--Hb_009062_020 Hb_011628_010 Hb_011628_010 Hb_001136_080--Hb_011628_010 Hb_006483_070 Hb_006483_070 Hb_001136_080--Hb_006483_070 Hb_001709_120 Hb_001709_120 Hb_001136_080--Hb_001709_120 Hb_000333_140--Hb_011628_010 Hb_005211_170 Hb_005211_170 Hb_000333_140--Hb_005211_170 Hb_015292_020 Hb_015292_020 Hb_000333_140--Hb_015292_020 Hb_002307_150 Hb_002307_150 Hb_000333_140--Hb_002307_150 Hb_000310_040 Hb_000310_040 Hb_000333_140--Hb_000310_040 Hb_016911_010--Hb_009062_020 Hb_039075_010 Hb_039075_010 Hb_016911_010--Hb_039075_010 Hb_051212_020 Hb_051212_020 Hb_016911_010--Hb_051212_020 Hb_001775_140 Hb_001775_140 Hb_016911_010--Hb_001775_140 Hb_016911_010--Hb_015292_020 Hb_009062_020--Hb_001775_140 Hb_000934_120 Hb_000934_120 Hb_009062_020--Hb_000934_120 Hb_009062_020--Hb_015292_020 Hb_009062_020--Hb_051212_020 Hb_011628_010--Hb_002307_150 Hb_011628_010--Hb_005211_170 Hb_009367_070 Hb_009367_070 Hb_011628_010--Hb_009367_070 Hb_011628_010--Hb_039075_010 Hb_001025_130 Hb_001025_130 Hb_006483_070--Hb_001025_130 Hb_006483_070--Hb_001709_120 Hb_162472_010 Hb_162472_010 Hb_006483_070--Hb_162472_010 Hb_006483_070--Hb_015292_020 Hb_001975_110 Hb_001975_110 Hb_006483_070--Hb_001975_110 Hb_001709_120--Hb_001025_130 Hb_001709_120--Hb_015292_020 Hb_002902_060 Hb_002902_060 Hb_001709_120--Hb_002902_060 Hb_174639_010 Hb_174639_010 Hb_001709_120--Hb_174639_010 Hb_001056_040 Hb_001056_040 Hb_001709_120--Hb_001056_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0529597 0.823735 9.13732 19.0245 0.133867 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.22356 2.02037

CAGE analysis