Hb_002902_060

Information

Type -
Description -
Location Contig2902: 44839-45617
Sequence    

Annotation

kegg
ID rcu:RCOM_0396190
description hypothetical protein
nr
ID XP_012079374.1
description PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAK8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12514 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30425: 43611-45696
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002902_060 0.0 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
2 Hb_010962_020 0.0557341522 transcription factor TF Family: OFP hypothetical protein RCOM_0815310 [Ricinus communis]
3 Hb_001047_090 0.0669786217 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP16-like [Jatropha curcas]
4 Hb_001709_120 0.0761271903 - - hypothetical protein RCOM_1313640 [Ricinus communis]
5 Hb_015292_020 0.0799118676 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_007122_020 0.0802770316 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
7 Hb_001975_110 0.082007072 - - -
8 Hb_001025_130 0.0828782414 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
9 Hb_001136_160 0.0898776702 - - catalytic, putative [Ricinus communis]
10 Hb_001056_040 0.0926549115 - - hypothetical protein POPTR_0006s04450g [Populus trichocarpa]
11 Hb_001898_040 0.0983732282 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_001140_300 0.1011363595 - - PREDICTED: tubulin beta-1 chain [Cicer arietinum]
13 Hb_050898_030 0.1030789827 - - conserved hypothetical protein [Ricinus communis]
14 Hb_174639_010 0.1040692499 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_053264_010 0.1058072744 - - beta glucosidase [Hevea brasiliensis]
16 Hb_004202_020 0.10616101 - - conserved hypothetical protein [Ricinus communis]
17 Hb_162472_010 0.106907541 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002783_100 0.1071038015 - - Zeamatin precursor, putative [Ricinus communis]
19 Hb_000140_320 0.1084133234 - - delta-8 sphingolipid desaturase [Vernicia fordii]
20 Hb_000207_060 0.1087232989 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]

Gene co-expression network

sample Hb_002902_060 Hb_002902_060 Hb_010962_020 Hb_010962_020 Hb_002902_060--Hb_010962_020 Hb_001047_090 Hb_001047_090 Hb_002902_060--Hb_001047_090 Hb_001709_120 Hb_001709_120 Hb_002902_060--Hb_001709_120 Hb_015292_020 Hb_015292_020 Hb_002902_060--Hb_015292_020 Hb_007122_020 Hb_007122_020 Hb_002902_060--Hb_007122_020 Hb_001975_110 Hb_001975_110 Hb_002902_060--Hb_001975_110 Hb_010962_020--Hb_001047_090 Hb_001898_040 Hb_001898_040 Hb_010962_020--Hb_001898_040 Hb_001136_160 Hb_001136_160 Hb_010962_020--Hb_001136_160 Hb_006846_040 Hb_006846_040 Hb_010962_020--Hb_006846_040 Hb_000003_280 Hb_000003_280 Hb_010962_020--Hb_000003_280 Hb_004202_020 Hb_004202_020 Hb_001047_090--Hb_004202_020 Hb_001047_090--Hb_006846_040 Hb_000103_450 Hb_000103_450 Hb_001047_090--Hb_000103_450 Hb_000392_110 Hb_000392_110 Hb_001047_090--Hb_000392_110 Hb_001025_130 Hb_001025_130 Hb_001709_120--Hb_001025_130 Hb_001709_120--Hb_015292_020 Hb_174639_010 Hb_174639_010 Hb_001709_120--Hb_174639_010 Hb_001056_040 Hb_001056_040 Hb_001709_120--Hb_001056_040 Hb_006483_070 Hb_006483_070 Hb_001709_120--Hb_006483_070 Hb_000333_140 Hb_000333_140 Hb_015292_020--Hb_000333_140 Hb_015292_020--Hb_001025_130 Hb_016911_010 Hb_016911_010 Hb_015292_020--Hb_016911_010 Hb_015292_020--Hb_007122_020 Hb_007122_020--Hb_001975_110 Hb_007122_020--Hb_001136_160 Hb_000964_040 Hb_000964_040 Hb_007122_020--Hb_000964_040 Hb_150299_010 Hb_150299_010 Hb_007122_020--Hb_150299_010 Hb_001136_040 Hb_001136_040 Hb_007122_020--Hb_001136_040 Hb_000005_290 Hb_000005_290 Hb_001975_110--Hb_000005_290 Hb_002309_020 Hb_002309_020 Hb_001975_110--Hb_002309_020 Hb_002636_120 Hb_002636_120 Hb_001975_110--Hb_002636_120 Hb_000317_380 Hb_000317_380 Hb_001975_110--Hb_000317_380 Hb_002783_100 Hb_002783_100 Hb_001975_110--Hb_002783_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.849632 9.29792 20.9835 0.034147 0.0486115
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.727008 5.08051

CAGE analysis