Hb_000317_380

Information

Type -
Description -
Location Contig317: 260814-262398
Sequence    

Annotation

kegg
ID rcu:RCOM_1176840
description Peroxidase 47 precursor, putative (EC:1.11.1.7)
nr
ID XP_002518016.1
description Peroxidase 47 precursor, putative [Ricinus communis]
swissprot
ID Q9SZB9
description Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2
trembl
ID B9RW97
description Peroxidase OS=Ricinus communis GN=RCOM_1176840 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 47

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33405: 260724-262396
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000317_380 0.0 - - Peroxidase 47 precursor, putative [Ricinus communis]
2 Hb_002783_100 0.0735582073 - - Zeamatin precursor, putative [Ricinus communis]
3 Hb_002092_060 0.077066393 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001975_110 0.078537205 - - -
5 Hb_002309_020 0.0795759035 - - hypothetical protein JCGZ_26057 [Jatropha curcas]
6 Hb_015175_070 0.0812938624 - - cysteine protease, putative [Ricinus communis]
7 Hb_000005_290 0.0818329372 - - Serine carboxypeptidase, putative [Ricinus communis]
8 Hb_002783_280 0.0898459683 - - PREDICTED: WEB family protein At1g75720 [Jatropha curcas]
9 Hb_002686_220 0.0907454064 - - PREDICTED: expansin-A15-like [Jatropha curcas]
10 Hb_007122_020 0.0942018941 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
11 Hb_005295_030 0.0992749734 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
12 Hb_004899_230 0.1007846303 - - Indole-3-acetic acid-induced protein ARG7, putative [Ricinus communis]
13 Hb_006153_140 0.1026929917 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
14 Hb_004162_200 0.1027066944 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
15 Hb_162472_010 0.1043190336 - - conserved hypothetical protein [Ricinus communis]
16 Hb_051212_020 0.105370967 - - PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Jatropha curcas]
17 Hb_000866_130 0.1076300547 - - hypothetical protein JCGZ_14397 [Jatropha curcas]
18 Hb_000140_320 0.1083090958 - - delta-8 sphingolipid desaturase [Vernicia fordii]
19 Hb_009079_020 0.1092864406 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
20 Hb_000724_060 0.1107231161 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]

Gene co-expression network

sample Hb_000317_380 Hb_000317_380 Hb_002783_100 Hb_002783_100 Hb_000317_380--Hb_002783_100 Hb_002092_060 Hb_002092_060 Hb_000317_380--Hb_002092_060 Hb_001975_110 Hb_001975_110 Hb_000317_380--Hb_001975_110 Hb_002309_020 Hb_002309_020 Hb_000317_380--Hb_002309_020 Hb_015175_070 Hb_015175_070 Hb_000317_380--Hb_015175_070 Hb_000005_290 Hb_000005_290 Hb_000317_380--Hb_000005_290 Hb_002783_100--Hb_000005_290 Hb_002783_100--Hb_001975_110 Hb_050898_040 Hb_050898_040 Hb_002783_100--Hb_050898_040 Hb_002783_100--Hb_002309_020 Hb_004162_200 Hb_004162_200 Hb_002783_100--Hb_004162_200 Hb_002092_060--Hb_015175_070 Hb_002092_060--Hb_002309_020 Hb_005295_030 Hb_005295_030 Hb_002092_060--Hb_005295_030 Hb_002092_060--Hb_000005_290 Hb_000310_050 Hb_000310_050 Hb_002092_060--Hb_000310_050 Hb_001975_110--Hb_000005_290 Hb_007122_020 Hb_007122_020 Hb_001975_110--Hb_007122_020 Hb_001975_110--Hb_002309_020 Hb_002636_120 Hb_002636_120 Hb_001975_110--Hb_002636_120 Hb_002309_020--Hb_000005_290 Hb_002309_020--Hb_015175_070 Hb_002309_020--Hb_005295_030 Hb_001496_150 Hb_001496_150 Hb_002309_020--Hb_001496_150 Hb_000336_120 Hb_000336_120 Hb_015175_070--Hb_000336_120 Hb_015175_070--Hb_000310_050 Hb_015175_070--Hb_005295_030 Hb_001349_040 Hb_001349_040 Hb_015175_070--Hb_001349_040 Hb_029883_010 Hb_029883_010 Hb_000005_290--Hb_029883_010 Hb_004899_230 Hb_004899_230 Hb_000005_290--Hb_004899_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0733606 1.47133 10.7786 36.6328 0 0.0369157
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0959734 0.113229 0.139333 0.166787 8.67437

CAGE analysis