Hb_001288_040

Information

Type -
Description -
Location Contig1288: 63790-64386
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001288_040 0.0 - - -
2 Hb_011861_130 0.0954894361 - - PREDICTED: uncharacterized protein LOC105634795 [Jatropha curcas]
3 Hb_003376_110 0.1100759033 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000331_300 0.1305265287 - - PREDICTED: malate synthase, glyoxysomal [Jatropha curcas]
5 Hb_007846_030 0.1315510128 - - Uncharacterized protein TCM_021839 [Theobroma cacao]
6 Hb_004128_150 0.1329391716 - - hypothetical protein POPTR_0016s08360g [Populus trichocarpa]
7 Hb_023640_020 0.136393431 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003085_070 0.1377192022 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
9 Hb_004880_040 0.1380633221 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
10 Hb_001301_310 0.1392195697 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000213_020 0.1401908007 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000056_290 0.1435228053 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001349_050 0.1439153829 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
14 Hb_000160_190 0.1441702119 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
15 Hb_005694_170 0.1453708405 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
16 Hb_001329_050 0.1462314027 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000878_080 0.1468098925 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
18 Hb_097292_010 0.1486752811 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
19 Hb_002203_010 0.150273898 - - PREDICTED: kinesin-like protein KIF18B isoform X1 [Vitis vinifera]
20 Hb_003006_070 0.1523356663 - - aquaporin [Manihot esculenta]

Gene co-expression network

sample Hb_001288_040 Hb_001288_040 Hb_011861_130 Hb_011861_130 Hb_001288_040--Hb_011861_130 Hb_003376_110 Hb_003376_110 Hb_001288_040--Hb_003376_110 Hb_000331_300 Hb_000331_300 Hb_001288_040--Hb_000331_300 Hb_007846_030 Hb_007846_030 Hb_001288_040--Hb_007846_030 Hb_004128_150 Hb_004128_150 Hb_001288_040--Hb_004128_150 Hb_023640_020 Hb_023640_020 Hb_001288_040--Hb_023640_020 Hb_000878_080 Hb_000878_080 Hb_011861_130--Hb_000878_080 Hb_004880_040 Hb_004880_040 Hb_011861_130--Hb_004880_040 Hb_097292_010 Hb_097292_010 Hb_011861_130--Hb_097292_010 Hb_003750_090 Hb_003750_090 Hb_011861_130--Hb_003750_090 Hb_002203_010 Hb_002203_010 Hb_011861_130--Hb_002203_010 Hb_005694_170 Hb_005694_170 Hb_003376_110--Hb_005694_170 Hb_003207_210 Hb_003207_210 Hb_003376_110--Hb_003207_210 Hb_003376_110--Hb_007846_030 Hb_164337_010 Hb_164337_010 Hb_003376_110--Hb_164337_010 Hb_000160_190 Hb_000160_190 Hb_003376_110--Hb_000160_190 Hb_000056_290 Hb_000056_290 Hb_003376_110--Hb_000056_290 Hb_000283_090 Hb_000283_090 Hb_000331_300--Hb_000283_090 Hb_000069_510 Hb_000069_510 Hb_000331_300--Hb_000069_510 Hb_001301_310 Hb_001301_310 Hb_000331_300--Hb_001301_310 Hb_000331_300--Hb_003376_110 Hb_000331_300--Hb_000160_190 Hb_007846_030--Hb_097292_010 Hb_007426_190 Hb_007426_190 Hb_007846_030--Hb_007426_190 Hb_007846_030--Hb_005694_170 Hb_005731_040 Hb_005731_040 Hb_007846_030--Hb_005731_040 Hb_007846_030--Hb_000878_080 Hb_004007_050 Hb_004007_050 Hb_004128_150--Hb_004007_050 Hb_006614_020 Hb_006614_020 Hb_004128_150--Hb_006614_020 Hb_004128_150--Hb_023640_020 Hb_011310_170 Hb_011310_170 Hb_004128_150--Hb_011310_170 Hb_001958_040 Hb_001958_040 Hb_004128_150--Hb_001958_040 Hb_004453_160 Hb_004453_160 Hb_004128_150--Hb_004453_160 Hb_023640_020--Hb_000160_190 Hb_023640_020--Hb_004007_050 Hb_004137_110 Hb_004137_110 Hb_023640_020--Hb_004137_110 Hb_000139_040 Hb_000139_040 Hb_023640_020--Hb_000139_040 Hb_005977_080 Hb_005977_080 Hb_023640_020--Hb_005977_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.226727 3.22338 2.40913 0 0.106037
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.393117

CAGE analysis