Hb_011861_130

Information

Type -
Description -
Location Contig11861: 133893-134555
Sequence    

Annotation

kegg
ID cit:102614091
description vitellogenin-2-like
nr
ID XP_012073101.1
description PREDICTED: uncharacterized protein LOC105634795 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06084 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05541: 134248-134469
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011861_130 0.0 - - PREDICTED: uncharacterized protein LOC105634795 [Jatropha curcas]
2 Hb_001288_040 0.0954894361 - - -
3 Hb_000878_080 0.0967426585 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
4 Hb_004880_040 0.1092248162 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
5 Hb_097292_010 0.1150443265 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
6 Hb_003750_090 0.1238036806 - - BnaC02g34020D [Brassica napus]
7 Hb_002203_010 0.12529559 - - PREDICTED: kinesin-like protein KIF18B isoform X1 [Vitis vinifera]
8 Hb_007846_030 0.1262154298 - - Uncharacterized protein TCM_021839 [Theobroma cacao]
9 Hb_000213_020 0.1271859433 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005731_040 0.127513399 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
11 Hb_002894_060 0.1291015117 - - respiratory burst oxidase D [Manihot esculenta]
12 Hb_000320_010 0.1304679065 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002028_270 0.1305209122 - - Pectinesterase-1 precursor, putative [Ricinus communis]
14 Hb_001856_210 0.1310355993 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
15 Hb_001349_050 0.1320428421 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
16 Hb_000359_100 0.1353970842 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001329_050 0.1361181669 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000586_110 0.1371596032 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
19 Hb_003598_020 0.137783288 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12 [Jatropha curcas]
20 Hb_003085_070 0.138076453 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_011861_130 Hb_011861_130 Hb_001288_040 Hb_001288_040 Hb_011861_130--Hb_001288_040 Hb_000878_080 Hb_000878_080 Hb_011861_130--Hb_000878_080 Hb_004880_040 Hb_004880_040 Hb_011861_130--Hb_004880_040 Hb_097292_010 Hb_097292_010 Hb_011861_130--Hb_097292_010 Hb_003750_090 Hb_003750_090 Hb_011861_130--Hb_003750_090 Hb_002203_010 Hb_002203_010 Hb_011861_130--Hb_002203_010 Hb_003376_110 Hb_003376_110 Hb_001288_040--Hb_003376_110 Hb_000331_300 Hb_000331_300 Hb_001288_040--Hb_000331_300 Hb_007846_030 Hb_007846_030 Hb_001288_040--Hb_007846_030 Hb_004128_150 Hb_004128_150 Hb_001288_040--Hb_004128_150 Hb_023640_020 Hb_023640_020 Hb_001288_040--Hb_023640_020 Hb_002028_270 Hb_002028_270 Hb_000878_080--Hb_002028_270 Hb_000878_080--Hb_097292_010 Hb_001856_210 Hb_001856_210 Hb_000878_080--Hb_001856_210 Hb_002894_060 Hb_002894_060 Hb_000878_080--Hb_002894_060 Hb_000878_080--Hb_002203_010 Hb_004005_060 Hb_004005_060 Hb_000878_080--Hb_004005_060 Hb_003185_040 Hb_003185_040 Hb_004880_040--Hb_003185_040 Hb_105377_010 Hb_105377_010 Hb_004880_040--Hb_105377_010 Hb_003598_020 Hb_003598_020 Hb_004880_040--Hb_003598_020 Hb_004880_040--Hb_001856_210 Hb_004880_040--Hb_000878_080 Hb_003085_070 Hb_003085_070 Hb_004880_040--Hb_003085_070 Hb_097292_010--Hb_007846_030 Hb_005731_040 Hb_005731_040 Hb_097292_010--Hb_005731_040 Hb_000861_060 Hb_000861_060 Hb_097292_010--Hb_000861_060 Hb_000586_110 Hb_000586_110 Hb_097292_010--Hb_000586_110 Hb_007426_190 Hb_007426_190 Hb_097292_010--Hb_007426_190 Hb_000187_050 Hb_000187_050 Hb_003750_090--Hb_000187_050 Hb_000445_260 Hb_000445_260 Hb_003750_090--Hb_000445_260 Hb_002686_320 Hb_002686_320 Hb_003750_090--Hb_002686_320 Hb_001971_040 Hb_001971_040 Hb_003750_090--Hb_001971_040 Hb_009113_020 Hb_009113_020 Hb_003750_090--Hb_009113_020 Hb_000213_020 Hb_000213_020 Hb_002203_010--Hb_000213_020 Hb_000359_100 Hb_000359_100 Hb_002203_010--Hb_000359_100 Hb_001349_050 Hb_001349_050 Hb_002203_010--Hb_001349_050 Hb_002203_010--Hb_004005_060 Hb_002818_060 Hb_002818_060 Hb_002203_010--Hb_002818_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.147129 1.65726 1.79574 0 0.0670673
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0280004 0.269632

CAGE analysis