Hb_032050_070

Information

Type -
Description -
Location Contig32050: 56417-58281
Sequence    

Annotation

kegg
ID rcu:RCOM_0961200
description Peroxidase 12 precursor, putative (EC:1.11.1.7)
nr
ID XP_012073950.1
description PREDICTED: peroxidase 12-like [Jatropha curcas]
swissprot
ID Q96518
description Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2
trembl
ID A0A067KKA6
description Peroxidase OS=Jatropha curcas GN=JCGZ_08339 PE=3 SV=1
Gene Ontology
ID GO:0009505
description peroxidase 12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33860: 56382-58435
cDNA
(Sanger)
(ID:Location)		 002_I12.ab1: 56439-57863 , 004_I22.ab1: 56387-57816 , 026_F01.ab1: 56382-57373 , 033_P17.ab1: 56439-57843

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032050_070 0.0 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
2 Hb_003216_020 0.1320101966 transcription factor TF Family: Orphans PREDICTED: histidine kinase 2 [Jatropha curcas]
3 Hb_019040_010 0.1354445298 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
4 Hb_003602_090 0.1355589987 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9-like [Jatropha curcas]
5 Hb_001628_030 0.1411762652 - - PREDICTED: uncharacterized protein LOC105629266 isoform X1 [Jatropha curcas]
6 Hb_009510_050 0.1519510477 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000723_060 0.1585268018 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
8 Hb_082870_010 0.1586882491 - - Disease resistance protein RFL1, putative [Ricinus communis]
9 Hb_005000_200 0.1610938263 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
10 Hb_000991_110 0.162412767 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
11 Hb_000914_110 0.1643600346 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2 [Jatropha curcas]
12 Hb_010573_040 0.1646418025 - - PREDICTED: zinc-metallopeptidase, peroxisomal isoform X2 [Populus euphratica]
13 Hb_002894_040 0.1662004883 - - conserved hypothetical protein [Ricinus communis]
14 Hb_041145_010 0.1668924057 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
15 Hb_000236_120 0.1670637707 - - -
16 Hb_000111_190 0.171175334 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
17 Hb_001897_030 0.1717189826 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
18 Hb_055531_010 0.1718732359 - - PREDICTED: probable disease resistance protein At4g27220 isoform X2 [Pyrus x bretschneideri]
19 Hb_001699_050 0.1747046468 transcription factor TF Family: MYB hypothetical protein POPTR_0005s11410g [Populus trichocarpa]
20 Hb_036356_010 0.1750053314 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_032050_070 Hb_032050_070 Hb_003216_020 Hb_003216_020 Hb_032050_070--Hb_003216_020 Hb_019040_010 Hb_019040_010 Hb_032050_070--Hb_019040_010 Hb_003602_090 Hb_003602_090 Hb_032050_070--Hb_003602_090 Hb_001628_030 Hb_001628_030 Hb_032050_070--Hb_001628_030 Hb_009510_050 Hb_009510_050 Hb_032050_070--Hb_009510_050 Hb_000723_060 Hb_000723_060 Hb_032050_070--Hb_000723_060 Hb_055531_010 Hb_055531_010 Hb_003216_020--Hb_055531_010 Hb_000991_110 Hb_000991_110 Hb_003216_020--Hb_000991_110 Hb_003216_020--Hb_001628_030 Hb_003216_020--Hb_009510_050 Hb_003216_020--Hb_000723_060 Hb_019040_010--Hb_003602_090 Hb_019040_010--Hb_009510_050 Hb_006615_180 Hb_006615_180 Hb_019040_010--Hb_006615_180 Hb_082870_010 Hb_082870_010 Hb_019040_010--Hb_082870_010 Hb_000771_030 Hb_000771_030 Hb_019040_010--Hb_000771_030 Hb_017604_020 Hb_017604_020 Hb_019040_010--Hb_017604_020 Hb_003602_090--Hb_009510_050 Hb_003602_090--Hb_006615_180 Hb_003602_090--Hb_000723_060 Hb_003602_090--Hb_082870_010 Hb_117127_010 Hb_117127_010 Hb_003602_090--Hb_117127_010 Hb_041145_010 Hb_041145_010 Hb_001628_030--Hb_041145_010 Hb_036356_010 Hb_036356_010 Hb_001628_030--Hb_036356_010 Hb_002049_030 Hb_002049_030 Hb_001628_030--Hb_002049_030 Hb_133845_010 Hb_133845_010 Hb_001628_030--Hb_133845_010 Hb_138705_010 Hb_138705_010 Hb_001628_030--Hb_138705_010 Hb_009510_050--Hb_006615_180 Hb_009510_050--Hb_082870_010 Hb_009510_050--Hb_117127_010 Hb_009510_050--Hb_000723_060 Hb_009510_050--Hb_017604_020 Hb_000723_060--Hb_006615_180 Hb_000101_140 Hb_000101_140 Hb_000723_060--Hb_000101_140 Hb_002239_030 Hb_002239_030 Hb_000723_060--Hb_002239_030 Hb_000137_030 Hb_000137_030 Hb_000723_060--Hb_000137_030 Hb_000656_370 Hb_000656_370 Hb_000723_060--Hb_000656_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
53.25 737.201 256.514 594.327 18.6234 15.6772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.560167 0.0944228 0.11717 298.172 25.0941

CAGE analysis