Hb_000991_110

Information

Type -
Description -
Location Contig991: 158583-160827
Sequence    

Annotation

kegg
ID pop:POPTR_0006s09010g
description POPTRDRAFT_762397; hypothetical protein
nr
ID XP_012074988.1
description PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTT8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09118 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000991_110 0.0 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
2 Hb_006573_060 0.1024475735 - - hypothetical protein [Bruguiera gymnorhiza]
3 Hb_001897_030 0.103277759 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
4 Hb_005389_090 0.1045295169 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
5 Hb_000723_060 0.1119915164 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
6 Hb_002049_030 0.1132413923 - - PREDICTED: uncharacterized protein LOC105635940 isoform X3 [Jatropha curcas]
7 Hb_007313_050 0.1193553857 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
8 Hb_000137_030 0.1193637096 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Citrus sinensis]
9 Hb_000509_040 0.123564632 - - hypothetical protein VITISV_009716 [Vitis vinifera]
10 Hb_132517_010 0.1334889117 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like isoform X3 [Populus euphratica]
11 Hb_003864_020 0.133667193 - - kinase, putative [Ricinus communis]
12 Hb_145268_010 0.134185346 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
13 Hb_003216_020 0.137834657 transcription factor TF Family: Orphans PREDICTED: histidine kinase 2 [Jatropha curcas]
14 Hb_001568_120 0.1379424936 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
15 Hb_001019_140 0.1390689164 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_005396_110 0.1405726761 - - conserved hypothetical protein [Ricinus communis]
17 Hb_041145_010 0.143973485 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
18 Hb_138705_010 0.1459224847 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
19 Hb_001587_220 0.1462532852 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_010573_040 0.1488369909 - - PREDICTED: zinc-metallopeptidase, peroxisomal isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_000991_110 Hb_000991_110 Hb_006573_060 Hb_006573_060 Hb_000991_110--Hb_006573_060 Hb_001897_030 Hb_001897_030 Hb_000991_110--Hb_001897_030 Hb_005389_090 Hb_005389_090 Hb_000991_110--Hb_005389_090 Hb_000723_060 Hb_000723_060 Hb_000991_110--Hb_000723_060 Hb_002049_030 Hb_002049_030 Hb_000991_110--Hb_002049_030 Hb_007313_050 Hb_007313_050 Hb_000991_110--Hb_007313_050 Hb_001587_220 Hb_001587_220 Hb_006573_060--Hb_001587_220 Hb_006573_060--Hb_005389_090 Hb_000702_040 Hb_000702_040 Hb_006573_060--Hb_000702_040 Hb_004586_230 Hb_004586_230 Hb_006573_060--Hb_004586_230 Hb_003939_090 Hb_003939_090 Hb_006573_060--Hb_003939_090 Hb_001897_030--Hb_005389_090 Hb_132517_010 Hb_132517_010 Hb_001897_030--Hb_132517_010 Hb_000509_040 Hb_000509_040 Hb_001897_030--Hb_000509_040 Hb_005396_110 Hb_005396_110 Hb_001897_030--Hb_005396_110 Hb_087468_010 Hb_087468_010 Hb_001897_030--Hb_087468_010 Hb_005389_090--Hb_132517_010 Hb_005389_090--Hb_007313_050 Hb_005389_090--Hb_005396_110 Hb_006615_180 Hb_006615_180 Hb_000723_060--Hb_006615_180 Hb_000101_140 Hb_000101_140 Hb_000723_060--Hb_000101_140 Hb_003602_090 Hb_003602_090 Hb_000723_060--Hb_003602_090 Hb_002239_030 Hb_002239_030 Hb_000723_060--Hb_002239_030 Hb_000137_030 Hb_000137_030 Hb_000723_060--Hb_000137_030 Hb_000656_370 Hb_000656_370 Hb_000723_060--Hb_000656_370 Hb_138705_010 Hb_138705_010 Hb_002049_030--Hb_138705_010 Hb_001019_140 Hb_001019_140 Hb_002049_030--Hb_001019_140 Hb_002049_030--Hb_000509_040 Hb_048937_010 Hb_048937_010 Hb_002049_030--Hb_048937_010 Hb_145268_010 Hb_145268_010 Hb_002049_030--Hb_145268_010 Hb_021443_020 Hb_021443_020 Hb_007313_050--Hb_021443_020 Hb_001213_080 Hb_001213_080 Hb_007313_050--Hb_001213_080 Hb_007313_050--Hb_003939_090 Hb_001059_050 Hb_001059_050 Hb_007313_050--Hb_001059_050 Hb_035006_010 Hb_035006_010 Hb_007313_050--Hb_035006_010 Hb_000286_210 Hb_000286_210 Hb_007313_050--Hb_000286_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.53206 0.410556 1.15082 0 0.0216818
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.317993 0.0465161

CAGE analysis