Hb_000661_280

Information

Type -
Description -
Location Contig661: 327125-331083
Sequence    

Annotation

kegg
ID rcu:RCOM_1578640
description hypothetical protein
nr
ID XP_012090030.1
description PREDICTED: protein TRAUCO [Jatropha curcas]
swissprot
ID Q9C8J7
description Protein TRAUCO OS=Arabidopsis thaliana GN=TRO PE=1 SV=1
trembl
ID A0A067JH28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25944 PE=4 SV=1
Gene Ontology
ID GO:0048188
description set1 ash2 histone methyltransferase complex subunit ash2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000661_280 0.0 - - PREDICTED: protein TRAUCO [Jatropha curcas]
2 Hb_001277_040 0.1339772149 - - PREDICTED: uncharacterized protein LOC105632066 [Jatropha curcas]
3 Hb_008112_010 0.1720306272 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Jatropha curcas]
4 Hb_011689_100 0.173317588 - - PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]
5 Hb_000638_150 0.1816595692 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
6 Hb_000840_070 0.1884755038 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
7 Hb_004667_040 0.1958944873 - - ATP binding protein, putative [Ricinus communis]
8 Hb_001195_350 0.2024303663 - - hypothetical protein JCGZ_04423 [Jatropha curcas]
9 Hb_001085_300 0.2032713739 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
10 Hb_052117_010 0.2059925145 - - kinase, putative [Ricinus communis]
11 Hb_004631_110 0.2069826552 - - ring finger protein, putative [Ricinus communis]
12 Hb_000256_120 0.2074873637 - - PREDICTED: probable receptor-like protein kinase At1g80640 [Jatropha curcas]
13 Hb_005000_140 0.2092027584 - - PREDICTED: uncharacterized protein LOC105637876 isoform X1 [Jatropha curcas]
14 Hb_000567_350 0.2103534062 - - PREDICTED: probable acyl-activating enzyme 6 [Jatropha curcas]
15 Hb_002233_070 0.2105152318 - - unnamed protein product [Vitis vinifera]
16 Hb_000009_140 0.2108566726 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
17 Hb_000950_040 0.2108893237 - - cation-transporting atpase plant, putative [Ricinus communis]
18 Hb_009745_010 0.211472756 - - cellulose synthase-like protein [Populus tomentosa]
19 Hb_006831_080 0.2132553378 - - PREDICTED: uncharacterized protein LOC105642126 [Jatropha curcas]
20 Hb_002122_030 0.2158747879 - - -

Gene co-expression network

sample Hb_000661_280 Hb_000661_280 Hb_001277_040 Hb_001277_040 Hb_000661_280--Hb_001277_040 Hb_008112_010 Hb_008112_010 Hb_000661_280--Hb_008112_010 Hb_011689_100 Hb_011689_100 Hb_000661_280--Hb_011689_100 Hb_000638_150 Hb_000638_150 Hb_000661_280--Hb_000638_150 Hb_000840_070 Hb_000840_070 Hb_000661_280--Hb_000840_070 Hb_004667_040 Hb_004667_040 Hb_000661_280--Hb_004667_040 Hb_003226_110 Hb_003226_110 Hb_001277_040--Hb_003226_110 Hb_001195_350 Hb_001195_350 Hb_001277_040--Hb_001195_350 Hb_000950_040 Hb_000950_040 Hb_001277_040--Hb_000950_040 Hb_005649_090 Hb_005649_090 Hb_001277_040--Hb_005649_090 Hb_000270_110 Hb_000270_110 Hb_001277_040--Hb_000270_110 Hb_000009_200 Hb_000009_200 Hb_008112_010--Hb_000009_200 Hb_056196_060 Hb_056196_060 Hb_008112_010--Hb_056196_060 Hb_005714_100 Hb_005714_100 Hb_008112_010--Hb_005714_100 Hb_000035_050 Hb_000035_050 Hb_008112_010--Hb_000035_050 Hb_001085_300 Hb_001085_300 Hb_008112_010--Hb_001085_300 Hb_000735_140 Hb_000735_140 Hb_008112_010--Hb_000735_140 Hb_002122_030 Hb_002122_030 Hb_011689_100--Hb_002122_030 Hb_012787_040 Hb_012787_040 Hb_011689_100--Hb_012787_040 Hb_001053_200 Hb_001053_200 Hb_011689_100--Hb_001053_200 Hb_000610_060 Hb_000610_060 Hb_011689_100--Hb_000610_060 Hb_000803_060 Hb_000803_060 Hb_011689_100--Hb_000803_060 Hb_002233_070 Hb_002233_070 Hb_011689_100--Hb_002233_070 Hb_001122_010 Hb_001122_010 Hb_000638_150--Hb_001122_010 Hb_000256_120 Hb_000256_120 Hb_000638_150--Hb_000256_120 Hb_000638_150--Hb_001277_040 Hb_010270_010 Hb_010270_010 Hb_000638_150--Hb_010270_010 Hb_009710_020 Hb_009710_020 Hb_000638_150--Hb_009710_020 Hb_004631_110 Hb_004631_110 Hb_000840_070--Hb_004631_110 Hb_000840_070--Hb_001195_350 Hb_002471_140 Hb_002471_140 Hb_000840_070--Hb_002471_140 Hb_001856_170 Hb_001856_170 Hb_000840_070--Hb_001856_170 Hb_000465_260 Hb_000465_260 Hb_000840_070--Hb_000465_260 Hb_000009_140 Hb_000009_140 Hb_000840_070--Hb_000009_140 Hb_002641_050 Hb_002641_050 Hb_004667_040--Hb_002641_050 Hb_095471_020 Hb_095471_020 Hb_004667_040--Hb_095471_020 Hb_065755_020 Hb_065755_020 Hb_004667_040--Hb_065755_020 Hb_000069_430 Hb_000069_430 Hb_004667_040--Hb_000069_430 Hb_025236_020 Hb_025236_020 Hb_004667_040--Hb_025236_020 Hb_002343_020 Hb_002343_020 Hb_004667_040--Hb_002343_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.64269 10.4573 6.98506 7.99124 0.949722 0.418625
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.437833 0.602831 0.690495 4.07604 1.99077

CAGE analysis