Hb_000009_140

Information

Type transcription factor
Description TF Family: BES1
Location Contig9: 141230-144644
Sequence    

Annotation

kegg
ID rcu:RCOM_0553190
description BRASSINAZOLE-RESISTANT 1 protein, putative
nr
ID XP_002525100.1
description BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
swissprot
ID Q94A43
description BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1
trembl
ID B9SGI1
description BRASSINAZOLE-RESISTANT 1 protein, putative OS=Ricinus communis GN=RCOM_0553190 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61843: 141233-144614
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_140 0.0 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
2 Hb_005504_030 0.0790974569 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Pyrus x bretschneideri]
3 Hb_004586_240 0.0884616743 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
4 Hb_033363_010 0.0904211963 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
5 Hb_000072_020 0.1118758631 - - PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Jatropha curcas]
6 Hb_009646_010 0.1171956767 - - PREDICTED: hyoscyamine 6-dioxygenase-like [Jatropha curcas]
7 Hb_010068_070 0.1203624589 - - calcium-dependent protein kinase, putative [Ricinus communis]
8 Hb_001195_350 0.1236843632 - - hypothetical protein JCGZ_04423 [Jatropha curcas]
9 Hb_000258_090 0.1239255867 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
10 Hb_000174_140 0.1255024723 - - JHL23J11.8 [Jatropha curcas]
11 Hb_000465_260 0.1261393725 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT4-like [Jatropha curcas]
12 Hb_000111_370 0.1281424466 - - PREDICTED: cation/H(+) antiporter 2-like [Jatropha curcas]
13 Hb_000363_410 0.1290313402 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
14 Hb_000139_140 0.1294492353 - - Acyl-CoA synthetase [Ricinus communis]
15 Hb_001856_170 0.1295920109 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
16 Hb_000649_120 0.1311337885 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_000840_070 0.1321867546 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
18 Hb_009372_020 0.1334235706 - - PREDICTED: protein transport protein Sec61 subunit alpha-like [Jatropha curcas]
19 Hb_003964_110 0.1338600991 - - PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Jatropha curcas]
20 Hb_001009_150 0.1347762712 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]

Gene co-expression network

sample Hb_000009_140 Hb_000009_140 Hb_005504_030 Hb_005504_030 Hb_000009_140--Hb_005504_030 Hb_004586_240 Hb_004586_240 Hb_000009_140--Hb_004586_240 Hb_033363_010 Hb_033363_010 Hb_000009_140--Hb_033363_010 Hb_000072_020 Hb_000072_020 Hb_000009_140--Hb_000072_020 Hb_009646_010 Hb_009646_010 Hb_000009_140--Hb_009646_010 Hb_010068_070 Hb_010068_070 Hb_000009_140--Hb_010068_070 Hb_005504_030--Hb_004586_240 Hb_005504_030--Hb_033363_010 Hb_000258_090 Hb_000258_090 Hb_005504_030--Hb_000258_090 Hb_005504_030--Hb_000072_020 Hb_005504_030--Hb_010068_070 Hb_001856_170 Hb_001856_170 Hb_004586_240--Hb_001856_170 Hb_000120_310 Hb_000120_310 Hb_004586_240--Hb_000120_310 Hb_001369_160 Hb_001369_160 Hb_004586_240--Hb_001369_160 Hb_001596_020 Hb_001596_020 Hb_004586_240--Hb_001596_020 Hb_033363_010--Hb_000072_020 Hb_000227_320 Hb_000227_320 Hb_033363_010--Hb_000227_320 Hb_000111_370 Hb_000111_370 Hb_033363_010--Hb_000111_370 Hb_009372_020 Hb_009372_020 Hb_033363_010--Hb_009372_020 Hb_000072_020--Hb_000227_320 Hb_003964_110 Hb_003964_110 Hb_000072_020--Hb_003964_110 Hb_002235_310 Hb_002235_310 Hb_000072_020--Hb_002235_310 Hb_000805_190 Hb_000805_190 Hb_000072_020--Hb_000805_190 Hb_000133_090 Hb_000133_090 Hb_000072_020--Hb_000133_090 Hb_000465_260 Hb_000465_260 Hb_009646_010--Hb_000465_260 Hb_002151_100 Hb_002151_100 Hb_009646_010--Hb_002151_100 Hb_000110_300 Hb_000110_300 Hb_009646_010--Hb_000110_300 Hb_001341_200 Hb_001341_200 Hb_009646_010--Hb_001341_200 Hb_000056_280 Hb_000056_280 Hb_009646_010--Hb_000056_280 Hb_128589_010 Hb_128589_010 Hb_009646_010--Hb_128589_010 Hb_010068_070--Hb_009372_020 Hb_060094_010 Hb_060094_010 Hb_010068_070--Hb_060094_010 Hb_000890_160 Hb_000890_160 Hb_010068_070--Hb_000890_160 Hb_000156_090 Hb_000156_090 Hb_010068_070--Hb_000156_090 Hb_010068_070--Hb_033363_010 Hb_002965_050 Hb_002965_050 Hb_010068_070--Hb_002965_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.0221 36.5557 27.5951 35.7303 5.19427 4.76288
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.46013 5.09379 8.19383 35.8408 11.9705

CAGE analysis