Hb_001481_020

Information

Type -
Description -
Location Contig1481: 30249-32271
Sequence    

Annotation

kegg
ID rcu:RCOM_0072320
description carbohydrate binding protein, putative (EC:2.7.11.22)
nr
ID XP_012070135.1
description PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
swissprot
ID Q9SZD5
description L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1
trembl
ID A0A067KY43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03434 PE=3 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001481_020 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
2 Hb_003442_010 0.1672214849 - - PREDICTED: structural maintenance of chromosomes protein 4-like isoform X2 [Citrus sinensis]
3 Hb_000608_020 0.1788982164 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
4 Hb_000189_490 0.1833526864 - - Sulfate/thiosulfate import ATP-binding protein cysA [Theobroma cacao]
5 Hb_000365_290 0.1837159094 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
6 Hb_004156_010 0.1900536284 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
7 Hb_068332_010 0.1920327227 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
8 Hb_002762_070 0.1926420588 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
9 Hb_051100_010 0.1950721464 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
10 Hb_006020_010 0.1961616377 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
11 Hb_183820_010 0.1976420618 - - Disease resistance protein RFL1, putative [Ricinus communis]
12 Hb_001377_500 0.1976453433 - - DOF AFFECTING GERMINATION 2 family protein [Populus trichocarpa]
13 Hb_002660_100 0.2002951765 - - plasma membrane intrinsic protein [Hevea brasiliensis]
14 Hb_005000_200 0.2038042571 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
15 Hb_136884_010 0.2043721237 - - Disease resistance protein RFL1, putative [Ricinus communis]
16 Hb_001558_070 0.2051235867 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
17 Hb_017661_020 0.2071364635 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
18 Hb_004837_170 0.207338779 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
19 Hb_027445_080 0.2076351558 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
20 Hb_004341_010 0.2089367648 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]

Gene co-expression network

sample Hb_001481_020 Hb_001481_020 Hb_003442_010 Hb_003442_010 Hb_001481_020--Hb_003442_010 Hb_000608_020 Hb_000608_020 Hb_001481_020--Hb_000608_020 Hb_000189_490 Hb_000189_490 Hb_001481_020--Hb_000189_490 Hb_000365_290 Hb_000365_290 Hb_001481_020--Hb_000365_290 Hb_004156_010 Hb_004156_010 Hb_001481_020--Hb_004156_010 Hb_068332_010 Hb_068332_010 Hb_001481_020--Hb_068332_010 Hb_003442_010--Hb_000189_490 Hb_183820_010 Hb_183820_010 Hb_003442_010--Hb_183820_010 Hb_001103_040 Hb_001103_040 Hb_003442_010--Hb_001103_040 Hb_003442_010--Hb_000365_290 Hb_083493_020 Hb_083493_020 Hb_003442_010--Hb_083493_020 Hb_002660_100 Hb_002660_100 Hb_000608_020--Hb_002660_100 Hb_001377_500 Hb_001377_500 Hb_000608_020--Hb_001377_500 Hb_000429_110 Hb_000429_110 Hb_000608_020--Hb_000429_110 Hb_001558_070 Hb_001558_070 Hb_000608_020--Hb_001558_070 Hb_001259_100 Hb_001259_100 Hb_000608_020--Hb_001259_100 Hb_002928_180 Hb_002928_180 Hb_000608_020--Hb_002928_180 Hb_031954_010 Hb_031954_010 Hb_000189_490--Hb_031954_010 Hb_000189_490--Hb_001103_040 Hb_004341_010 Hb_004341_010 Hb_000189_490--Hb_004341_010 Hb_001283_010 Hb_001283_010 Hb_000189_490--Hb_001283_010 Hb_000189_490--Hb_000365_290 Hb_002762_070 Hb_002762_070 Hb_000365_290--Hb_002762_070 Hb_006395_010 Hb_006395_010 Hb_000365_290--Hb_006395_010 Hb_000365_290--Hb_001283_010 Hb_027445_080 Hb_027445_080 Hb_000365_290--Hb_027445_080 Hb_028207_030 Hb_028207_030 Hb_000365_290--Hb_028207_030 Hb_000077_460 Hb_000077_460 Hb_000365_290--Hb_000077_460 Hb_004156_010--Hb_027445_080 Hb_031862_090 Hb_031862_090 Hb_004156_010--Hb_031862_090 Hb_005203_010 Hb_005203_010 Hb_004156_010--Hb_005203_010 Hb_004156_010--Hb_002762_070 Hb_017661_020 Hb_017661_020 Hb_004156_010--Hb_017661_020 Hb_002282_030 Hb_002282_030 Hb_004156_010--Hb_002282_030 Hb_008406_020 Hb_008406_020 Hb_068332_010--Hb_008406_020 Hb_168068_010 Hb_168068_010 Hb_068332_010--Hb_168068_010 Hb_000120_070 Hb_000120_070 Hb_068332_010--Hb_000120_070 Hb_002276_100 Hb_002276_100 Hb_068332_010--Hb_002276_100 Hb_003376_200 Hb_003376_200 Hb_068332_010--Hb_003376_200 Hb_003556_070 Hb_003556_070 Hb_068332_010--Hb_003556_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.114272 1.18646 0.150687 0.698995 0 0.00909345
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.070394 0.783929 0

CAGE analysis