Hb_001558_070

Information

Type -
Description -
Location Contig1558: 52270-53247
Sequence    

Annotation

kegg
ID rcu:RCOM_0070090
description mitochondrial dicarboxylate carrier protein, putative
nr
ID XP_012081649.1
description PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
swissprot
ID Q9SB52
description Mitochondrial uncoupling protein 4 OS=Arabidopsis thaliana GN=PUMP4 PE=2 SV=1
trembl
ID A0A067K0M9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18686 PE=3 SV=1
Gene Ontology
ID GO:0031966
description mitochondrial uncoupling protein 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13518: 52059-53256
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001558_070 0.0 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
2 Hb_001862_170 0.1404904344 - - zinc finger protein, putative [Ricinus communis]
3 Hb_000608_020 0.1617834003 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
4 Hb_001454_360 0.1655728481 - - PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]
5 Hb_000429_110 0.1683912896 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2-like [Populus euphratica]
6 Hb_008948_060 0.1702186723 - - conserved hypothetical protein [Ricinus communis]
7 Hb_073171_010 0.1739095938 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
8 Hb_001318_290 0.1758884976 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
9 Hb_001259_100 0.1772066759 - - chloride channel-like family protein [Populus trichocarpa]
10 Hb_002326_080 0.177800693 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.6 [Jatropha curcas]
11 Hb_001227_020 0.1811625844 - - -
12 Hb_002660_100 0.1888982083 - - plasma membrane intrinsic protein [Hevea brasiliensis]
13 Hb_004156_010 0.1898135334 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
14 Hb_124315_030 0.1903399307 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
15 Hb_004044_030 0.19321528 - - PREDICTED: uncharacterized protein LOC105639335 [Jatropha curcas]
16 Hb_052764_080 0.1939566877 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Jatropha curcas]
17 Hb_006198_140 0.1970049666 - - hypothetical protein L484_015208 [Morus notabilis]
18 Hb_004837_170 0.1982260982 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
19 Hb_002762_070 0.1998029603 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
20 Hb_000365_290 0.2029057532 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001558_070 Hb_001558_070 Hb_001862_170 Hb_001862_170 Hb_001558_070--Hb_001862_170 Hb_000608_020 Hb_000608_020 Hb_001558_070--Hb_000608_020 Hb_001454_360 Hb_001454_360 Hb_001558_070--Hb_001454_360 Hb_000429_110 Hb_000429_110 Hb_001558_070--Hb_000429_110 Hb_008948_060 Hb_008948_060 Hb_001558_070--Hb_008948_060 Hb_073171_010 Hb_073171_010 Hb_001558_070--Hb_073171_010 Hb_001862_170--Hb_073171_010 Hb_001862_170--Hb_008948_060 Hb_001006_030 Hb_001006_030 Hb_001862_170--Hb_001006_030 Hb_001493_170 Hb_001493_170 Hb_001862_170--Hb_001493_170 Hb_002461_070 Hb_002461_070 Hb_001862_170--Hb_002461_070 Hb_002660_100 Hb_002660_100 Hb_000608_020--Hb_002660_100 Hb_001377_500 Hb_001377_500 Hb_000608_020--Hb_001377_500 Hb_000608_020--Hb_000429_110 Hb_001259_100 Hb_001259_100 Hb_000608_020--Hb_001259_100 Hb_002928_180 Hb_002928_180 Hb_000608_020--Hb_002928_180 Hb_001454_360--Hb_008948_060 Hb_000000_280 Hb_000000_280 Hb_001454_360--Hb_000000_280 Hb_007403_010 Hb_007403_010 Hb_001454_360--Hb_007403_010 Hb_001454_360--Hb_073171_010 Hb_017661_020 Hb_017661_020 Hb_001454_360--Hb_017661_020 Hb_000429_110--Hb_002928_180 Hb_052764_080 Hb_052764_080 Hb_000429_110--Hb_052764_080 Hb_000429_110--Hb_001259_100 Hb_002928_120 Hb_002928_120 Hb_000429_110--Hb_002928_120 Hb_010174_190 Hb_010174_190 Hb_000429_110--Hb_010174_190 Hb_001355_070 Hb_001355_070 Hb_000429_110--Hb_001355_070 Hb_000359_320 Hb_000359_320 Hb_008948_060--Hb_000359_320 Hb_008948_060--Hb_073171_010 Hb_002236_070 Hb_002236_070 Hb_008948_060--Hb_002236_070 Hb_006020_010 Hb_006020_010 Hb_008948_060--Hb_006020_010 Hb_073171_010--Hb_001259_100 Hb_073171_010--Hb_052764_080 Hb_000152_250 Hb_000152_250 Hb_073171_010--Hb_000152_250 Hb_015473_010 Hb_015473_010 Hb_073171_010--Hb_015473_010 Hb_005183_200 Hb_005183_200 Hb_073171_010--Hb_005183_200 Hb_001823_070 Hb_001823_070 Hb_073171_010--Hb_001823_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.665264 34.5458 2.06261 24.6886 0.0213163 0.0253139
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.97994 2.74556 2.1088 28.2117 0.418481

CAGE analysis