Hb_001823_070

Information

Type -
Description -
Location Contig1823: 56552-57352
Sequence    

Annotation

kegg
ID rcu:RCOM_1180720
description hypothetical protein
nr
ID XP_012076209.1
description PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KE41
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11265 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17766: 56838-57069
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001823_070 0.0 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
2 Hb_006364_020 0.0784222724 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
3 Hb_126466_010 0.0961407543 - - alcohol dehydrogenase, putative [Ricinus communis]
4 Hb_000111_190 0.1000399226 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
5 Hb_002477_080 0.1000755912 - - hypothetical protein RCOM_0653450 [Ricinus communis]
6 Hb_000152_250 0.113641767 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
7 Hb_130967_010 0.1155254511 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_000028_460 0.1185635803 - - hypothetical protein POPTR_0015s05340g [Populus trichocarpa]
9 Hb_050898_010 0.1206213522 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
10 Hb_000907_120 0.1207120275 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
11 Hb_003439_020 0.1213250156 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
12 Hb_015473_010 0.1220409592 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
13 Hb_000316_080 0.1289467432 - - ENTH/VHS family protein [Theobroma cacao]
14 Hb_002970_070 0.1290986811 - - multidrug/pheromone exporter protein [Hevea brasiliensis]
15 Hb_003439_090 0.1319065383 - - kinase, putative [Ricinus communis]
16 Hb_073171_010 0.1343156412 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
17 Hb_002272_070 0.1346361261 - - PREDICTED: keratin, type I cytoskeletal 9 [Jatropha curcas]
18 Hb_002431_090 0.1382462721 - - conserved hypothetical protein [Ricinus communis]
19 Hb_134017_010 0.1410967905 - - kinase, putative [Ricinus communis]
20 Hb_000586_100 0.1415552201 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001823_070 Hb_001823_070 Hb_006364_020 Hb_006364_020 Hb_001823_070--Hb_006364_020 Hb_126466_010 Hb_126466_010 Hb_001823_070--Hb_126466_010 Hb_000111_190 Hb_000111_190 Hb_001823_070--Hb_000111_190 Hb_002477_080 Hb_002477_080 Hb_001823_070--Hb_002477_080 Hb_000152_250 Hb_000152_250 Hb_001823_070--Hb_000152_250 Hb_130967_010 Hb_130967_010 Hb_001823_070--Hb_130967_010 Hb_006364_020--Hb_000111_190 Hb_000586_100 Hb_000586_100 Hb_006364_020--Hb_000586_100 Hb_006364_020--Hb_130967_010 Hb_000907_120 Hb_000907_120 Hb_006364_020--Hb_000907_120 Hb_003439_090 Hb_003439_090 Hb_006364_020--Hb_003439_090 Hb_002272_070 Hb_002272_070 Hb_126466_010--Hb_002272_070 Hb_003439_020 Hb_003439_020 Hb_126466_010--Hb_003439_020 Hb_000028_460 Hb_000028_460 Hb_126466_010--Hb_000028_460 Hb_011470_010 Hb_011470_010 Hb_126466_010--Hb_011470_010 Hb_126466_010--Hb_002477_080 Hb_000111_190--Hb_000907_120 Hb_003579_040 Hb_003579_040 Hb_000111_190--Hb_003579_040 Hb_006020_010 Hb_006020_010 Hb_000111_190--Hb_006020_010 Hb_005784_020 Hb_005784_020 Hb_000111_190--Hb_005784_020 Hb_000899_060 Hb_000899_060 Hb_002477_080--Hb_000899_060 Hb_002431_090 Hb_002431_090 Hb_002477_080--Hb_002431_090 Hb_000816_050 Hb_000816_050 Hb_002477_080--Hb_000816_050 Hb_103541_010 Hb_103541_010 Hb_002477_080--Hb_103541_010 Hb_002477_080--Hb_000028_460 Hb_015473_010 Hb_015473_010 Hb_000152_250--Hb_015473_010 Hb_000152_250--Hb_000907_120 Hb_002735_010 Hb_002735_010 Hb_000152_250--Hb_002735_010 Hb_000152_250--Hb_003439_090 Hb_000521_210 Hb_000521_210 Hb_000152_250--Hb_000521_210 Hb_000152_250--Hb_006020_010 Hb_134017_010 Hb_134017_010 Hb_130967_010--Hb_134017_010 Hb_003788_010 Hb_003788_010 Hb_130967_010--Hb_003788_010 Hb_130967_010--Hb_000586_100 Hb_130967_010--Hb_003439_090 Hb_002970_070 Hb_002970_070 Hb_130967_010--Hb_002970_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.81302 0.816115 5.89782 0.0570785 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.40977 1.55924

CAGE analysis