Hb_003579_040

Information

Type -
Description -
Location Contig3579: 57733-59135
Sequence    

Annotation

kegg
ID rcu:RCOM_1035680
description abhydrolase domain containing, putative
nr
ID XP_012067878.1
description PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
swissprot
ID Q8R2Y0
description Monoacylglycerol lipase ABHD6 OS=Mus musculus GN=Abhd6 PE=1 SV=1
trembl
ID A0A067KYV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15793 PE=4 SV=1
Gene Ontology
ID GO:0016787
description monoacylglycerol lipase abhd6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36866: 57901-58323 , PASA_asmbl_36867: 58360-59196
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003579_040 0.0 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
2 Hb_003025_150 0.0914579835 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002324_040 0.1049305887 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
4 Hb_000111_190 0.1098598406 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
5 Hb_012727_010 0.1299290246 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
6 Hb_000914_110 0.1320426755 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2 [Jatropha curcas]
7 Hb_004544_090 0.1341416285 - - cytochrome P450, putative [Ricinus communis]
8 Hb_000411_050 0.1354718836 - - hypothetical protein AMTR_s00066p00166230 [Amborella trichopoda]
9 Hb_000454_200 0.1357205857 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
10 Hb_000847_050 0.1367749413 - - PREDICTED: dCTP pyrophosphatase 1-like [Jatropha curcas]
11 Hb_010174_190 0.13700751 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
12 Hb_002324_050 0.1381070315 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
13 Hb_001856_160 0.1381749282 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006364_020 0.1398634588 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
15 Hb_010381_110 0.1408690432 - - PRA1 family protein [Theobroma cacao]
16 Hb_025432_010 0.1423774051 - - hypothetical protein JCGZ_21627 [Jatropha curcas]
17 Hb_002078_250 0.1423923714 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007625_030 0.14264472 - - unknown [Medicago truncatula]
19 Hb_005087_030 0.1438198035 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
20 Hb_064047_010 0.1438466451 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003579_040 Hb_003579_040 Hb_003025_150 Hb_003025_150 Hb_003579_040--Hb_003025_150 Hb_002324_040 Hb_002324_040 Hb_003579_040--Hb_002324_040 Hb_000111_190 Hb_000111_190 Hb_003579_040--Hb_000111_190 Hb_012727_010 Hb_012727_010 Hb_003579_040--Hb_012727_010 Hb_000914_110 Hb_000914_110 Hb_003579_040--Hb_000914_110 Hb_004544_090 Hb_004544_090 Hb_003579_040--Hb_004544_090 Hb_003025_150--Hb_002324_040 Hb_002324_050 Hb_002324_050 Hb_003025_150--Hb_002324_050 Hb_003025_150--Hb_012727_010 Hb_002078_250 Hb_002078_250 Hb_003025_150--Hb_002078_250 Hb_003656_170 Hb_003656_170 Hb_003025_150--Hb_003656_170 Hb_002324_040--Hb_012727_010 Hb_002324_040--Hb_002324_050 Hb_064047_010 Hb_064047_010 Hb_002324_040--Hb_064047_010 Hb_004032_250 Hb_004032_250 Hb_002324_040--Hb_004032_250 Hb_006364_020 Hb_006364_020 Hb_000111_190--Hb_006364_020 Hb_001823_070 Hb_001823_070 Hb_000111_190--Hb_001823_070 Hb_000907_120 Hb_000907_120 Hb_000111_190--Hb_000907_120 Hb_006020_010 Hb_006020_010 Hb_000111_190--Hb_006020_010 Hb_005784_020 Hb_005784_020 Hb_000111_190--Hb_005784_020 Hb_003647_040 Hb_003647_040 Hb_012727_010--Hb_003647_040 Hb_001178_080 Hb_001178_080 Hb_012727_010--Hb_001178_080 Hb_001832_210 Hb_001832_210 Hb_012727_010--Hb_001832_210 Hb_000914_110--Hb_002078_250 Hb_000411_050 Hb_000411_050 Hb_000914_110--Hb_000411_050 Hb_168068_010 Hb_168068_010 Hb_000914_110--Hb_168068_010 Hb_010573_040 Hb_010573_040 Hb_000914_110--Hb_010573_040 Hb_028841_010 Hb_028841_010 Hb_000914_110--Hb_028841_010 Hb_001123_170 Hb_001123_170 Hb_004544_090--Hb_001123_170 Hb_004544_090--Hb_000411_050 Hb_002276_100 Hb_002276_100 Hb_004544_090--Hb_002276_100 Hb_020285_010 Hb_020285_010 Hb_004544_090--Hb_020285_010 Hb_006002_010 Hb_006002_010 Hb_004544_090--Hb_006002_010 Hb_007894_030 Hb_007894_030 Hb_004544_090--Hb_007894_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0419346 2.46973 0.987494 2.73675 0.141695 0.0641426
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0377429 0.0696666 1.92563 0.542148

CAGE analysis