Hb_168068_010

Information

Type -
Description -
Location Contig168068: 157-720
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168068_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_005087_030 0.0946744002 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
3 Hb_000771_030 0.1094010419 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
4 Hb_068332_010 0.1142171878 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
5 Hb_131662_010 0.1184430827 - - Insulin-degrading enzyme, putative [Ricinus communis]
6 Hb_004544_090 0.1312290846 - - cytochrome P450, putative [Ricinus communis]
7 Hb_000417_120 0.1356771488 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
8 Hb_003376_300 0.1363349514 - - Aquaporin PIP2.2, putative [Ricinus communis]
9 Hb_065230_010 0.1372135067 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
10 Hb_002276_100 0.1372633094 - - PREDICTED: UDP-glycosyltransferase 89A2-like [Jatropha curcas]
11 Hb_000120_070 0.1373795448 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
12 Hb_005649_010 0.137712859 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
13 Hb_000914_110 0.1403535429 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2 [Jatropha curcas]
14 Hb_082870_010 0.1419144962 - - Disease resistance protein RFL1, putative [Ricinus communis]
15 Hb_001123_170 0.1446119272 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003579_040 0.144660987 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
17 Hb_000977_090 0.1451038854 - - hypothetical protein POPTR_0010s18550g [Populus trichocarpa]
18 Hb_000907_120 0.145255699 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
19 Hb_008406_020 0.1467399749 - - PREDICTED: probable aminotransferase TAT2 [Jatropha curcas]
20 Hb_007894_030 0.1473476252 - - calcium-dependent protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_168068_010 Hb_168068_010 Hb_005087_030 Hb_005087_030 Hb_168068_010--Hb_005087_030 Hb_000771_030 Hb_000771_030 Hb_168068_010--Hb_000771_030 Hb_068332_010 Hb_068332_010 Hb_168068_010--Hb_068332_010 Hb_131662_010 Hb_131662_010 Hb_168068_010--Hb_131662_010 Hb_004544_090 Hb_004544_090 Hb_168068_010--Hb_004544_090 Hb_000417_120 Hb_000417_120 Hb_168068_010--Hb_000417_120 Hb_003376_300 Hb_003376_300 Hb_005087_030--Hb_003376_300 Hb_005087_030--Hb_131662_010 Hb_002450_180 Hb_002450_180 Hb_005087_030--Hb_002450_180 Hb_000411_050 Hb_000411_050 Hb_005087_030--Hb_000411_050 Hb_005087_030--Hb_000771_030 Hb_065230_010 Hb_065230_010 Hb_000771_030--Hb_065230_010 Hb_000771_030--Hb_000417_120 Hb_000771_030--Hb_131662_010 Hb_000098_250 Hb_000098_250 Hb_000771_030--Hb_000098_250 Hb_000598_020 Hb_000598_020 Hb_000771_030--Hb_000598_020 Hb_002410_010 Hb_002410_010 Hb_000771_030--Hb_002410_010 Hb_008406_020 Hb_008406_020 Hb_068332_010--Hb_008406_020 Hb_000120_070 Hb_000120_070 Hb_068332_010--Hb_000120_070 Hb_002276_100 Hb_002276_100 Hb_068332_010--Hb_002276_100 Hb_003376_200 Hb_003376_200 Hb_068332_010--Hb_003376_200 Hb_003556_070 Hb_003556_070 Hb_068332_010--Hb_003556_070 Hb_131662_010--Hb_065230_010 Hb_000497_100 Hb_000497_100 Hb_131662_010--Hb_000497_100 Hb_010573_040 Hb_010573_040 Hb_131662_010--Hb_010573_040 Hb_000907_120 Hb_000907_120 Hb_131662_010--Hb_000907_120 Hb_001123_170 Hb_001123_170 Hb_004544_090--Hb_001123_170 Hb_004544_090--Hb_000411_050 Hb_004544_090--Hb_002276_100 Hb_020285_010 Hb_020285_010 Hb_004544_090--Hb_020285_010 Hb_006002_010 Hb_006002_010 Hb_004544_090--Hb_006002_010 Hb_007894_030 Hb_007894_030 Hb_004544_090--Hb_007894_030 Hb_000417_120--Hb_000598_020 Hb_000417_120--Hb_065230_010 Hb_000382_030 Hb_000382_030 Hb_000417_120--Hb_000382_030 Hb_000237_070 Hb_000237_070 Hb_000417_120--Hb_000237_070 Hb_000075_110 Hb_000075_110 Hb_000417_120--Hb_000075_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.5175 4.36151 6.00256 0.188645 0.0850722
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.11087 0 0.301819 6.45668 1.1679

CAGE analysis